Gene : Bradi2g13510 B. distachyon v3.1
Defline:  (1 of 1) PTHR12150:SF13 - DUF171 FAMILY PROTEIN Genomic Order:  1759
Name:  ? Bradi2g13510 Secondary Identifier:  ? PAC:32771931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g13510 0.5kb upstream 0.5kb upstream 6278 true Bd2: 11994769-12001046 Brachypodium distachyon
Bradi2g13510 0.5kb upstream 0.5kb upstream 500 false Bd2: 12000547-12001046 Brachypodium distachyon
Bradi2g13510 0.5kb downstream 0.5kb downstream 6278 true Bd2: 11994269-12000546 Brachypodium distachyon
Bradi2g13510 0.5kb downstream 0.5kb downstream 500 false Bd2: 11994269-11994768 Brachypodium distachyon
Bradi2g13510 1.0kb upstream 1.0kb upstream 6778 true Bd2: 11994769-12001546 Brachypodium distachyon
Bradi2g13510 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12000547-12001546 Brachypodium distachyon
Bradi2g13510 1.0kb downstream 1.0kb downstream 6778 true Bd2: 11993769-12000546 Brachypodium distachyon
Bradi2g13510 1.0kb downstream 1.0kb downstream 1000 false Bd2: 11993769-11994768 Brachypodium distachyon
Bradi2g13510 2.0kb upstream 2.0kb upstream 7778 true Bd2: 11994769-12002546 Brachypodium distachyon
Bradi2g13510 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12000547-12002546 Brachypodium distachyon
Bradi2g13510 2.0kb downstream 2.0kb downstream 7778 true Bd2: 11992769-12000546 Brachypodium distachyon
Bradi2g13510 2.0kb downstream 2.0kb downstream 2000 false Bd2: 11992769-11994768 Brachypodium distachyon
Bradi2g13510 5.0kb upstream 5.0kb upstream 10778 true Bd2: 11994769-12005546 Brachypodium distachyon
Bradi2g13510 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12000547-12005546 Brachypodium distachyon
Bradi2g13510 5.0kb downstream 5.0kb downstream 10778 true Bd2: 11989769-12000546 Brachypodium distachyon
Bradi2g13510 5.0kb downstream 5.0kb downstream 5000 false Bd2: 11989769-11994768 Brachypodium distachyon
Bradi2g13510 10.0kb upstream 10.0kb upstream 15778 true Bd2: 11994769-12010546 Brachypodium distachyon
Bradi2g13510 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12000547-12010546 Brachypodium distachyon
Bradi2g13510 10.0kb downstream 10.0kb downstream 15778 true Bd2: 11984769-12000546 Brachypodium distachyon
Bradi2g13510 10.0kb downstream 10.0kb downstream 10000 false Bd2: 11984769-11994768 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583383 5269 Grass View MSA
122044341 5273 Angiosperm View MSA
121344963 5274 Embryophyte View MSA
123425099 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.438        
cufflinks 0.583        
cufflinks 0.429        
cufflinks 0.588        
cufflinks 0.205       Low
cufflinks 0.498        
cufflinks 0.507        
cufflinks 0.432        
cufflinks 0.432        
cufflinks 0.3        
cufflinks 0.147       Low
cufflinks 0.336        
cufflinks 0.124       Low
cufflinks 0.149       Low
cufflinks 0.231        
cufflinks 0.459        
cufflinks 0.493        
cufflinks 0.97       High
cufflinks 0.505        
cufflinks 0.195       Low
cufflinks 0.521        
cufflinks 0.346        
cufflinks 0.334        
cufflinks 0.38        
cufflinks 0.499        
cufflinks 0.272        
cufflinks 0.179       Low
cufflinks 0.297        
cufflinks 0.273        
cufflinks 0.523        

0 Strain