Gene : Bradi2g09800 B. distachyon v3.1
Defline:  (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B) Genomic Order:  1260
Name:  ? Bradi2g09800 Secondary Identifier:  ? PAC:32779770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g09800 0.5kb upstream 0.5kb upstream 4342 true Bd2: 8037060-8041401 Brachypodium distachyon
Bradi2g09800 0.5kb upstream 0.5kb upstream 500 false Bd2: 8040902-8041401 Brachypodium distachyon
Bradi2g09800 0.5kb downstream 0.5kb downstream 4342 true Bd2: 8036560-8040901 Brachypodium distachyon
Bradi2g09800 0.5kb downstream 0.5kb downstream 500 false Bd2: 8036560-8037059 Brachypodium distachyon
Bradi2g09800 1.0kb upstream 1.0kb upstream 4842 true Bd2: 8037060-8041901 Brachypodium distachyon
Bradi2g09800 1.0kb upstream 1.0kb upstream 1000 false Bd2: 8040902-8041901 Brachypodium distachyon
Bradi2g09800 1.0kb downstream 1.0kb downstream 4842 true Bd2: 8036060-8040901 Brachypodium distachyon
Bradi2g09800 1.0kb downstream 1.0kb downstream 1000 false Bd2: 8036060-8037059 Brachypodium distachyon
Bradi2g09800 2.0kb upstream 2.0kb upstream 5842 true Bd2: 8037060-8042901 Brachypodium distachyon
Bradi2g09800 2.0kb upstream 2.0kb upstream 2000 false Bd2: 8040902-8042901 Brachypodium distachyon
Bradi2g09800 2.0kb downstream 2.0kb downstream 5842 true Bd2: 8035060-8040901 Brachypodium distachyon
Bradi2g09800 2.0kb downstream 2.0kb downstream 2000 false Bd2: 8035060-8037059 Brachypodium distachyon
Bradi2g09800 5.0kb upstream 5.0kb upstream 8842 true Bd2: 8037060-8045901 Brachypodium distachyon
Bradi2g09800 5.0kb upstream 5.0kb upstream 5000 false Bd2: 8040902-8045901 Brachypodium distachyon
Bradi2g09800 5.0kb downstream 5.0kb downstream 8842 true Bd2: 8032060-8040901 Brachypodium distachyon
Bradi2g09800 5.0kb downstream 5.0kb downstream 5000 false Bd2: 8032060-8037059 Brachypodium distachyon
Bradi2g09800 10.0kb upstream 10.0kb upstream 13842 true Bd2: 8037060-8050901 Brachypodium distachyon
Bradi2g09800 10.0kb upstream 10.0kb upstream 10000 false Bd2: 8040902-8050901 Brachypodium distachyon
Bradi2g09800 10.0kb downstream 10.0kb downstream 13842 true Bd2: 8027060-8040901 Brachypodium distachyon
Bradi2g09800 10.0kb downstream 10.0kb downstream 10000 false Bd2: 8027060-8037059 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587389 5269 Grass View MSA
122048656 5273 Angiosperm View MSA
121344631 5274 Embryophyte View MSA
123424475 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.197       Low
cufflinks 4.443        
cufflinks 4.471        
cufflinks 4.312        
cufflinks 3.675        
cufflinks 3.753        
cufflinks 3.814        
cufflinks 3.98        
cufflinks 4.128        
cufflinks 5.691       High
cufflinks 5.191        
cufflinks 3.597        
cufflinks 3.865        
cufflinks 4.265        
cufflinks 3.932        
cufflinks 3.593        
cufflinks 4.204        
cufflinks 4.451        
cufflinks 7.798       High
cufflinks 5.404       High
cufflinks 5.532       High
cufflinks 4.256        
cufflinks 3.638        
cufflinks 3.93        
cufflinks 4.219        
cufflinks 5.346       High
cufflinks 5.455       High
cufflinks 5.715       High
cufflinks 5.186        
cufflinks 3.457       Low

0 Strain