Gene : Bradi2g10480 B. distachyon v3.1
Defline:  (1 of 1) PTHR10202//PTHR10202:SF15 - PRESENILIN // SUBFAMILY NOT NAMED Genomic Order:  1343
Name:  ? Bradi2g10480 Secondary Identifier:  ? PAC:32776420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g10480 0.5kb upstream 0.5kb upstream 2313 true Bd2: 8703751-8706063 Brachypodium distachyon
Bradi2g10480 0.5kb upstream 0.5kb upstream 500 false Bd2: 8705564-8706063 Brachypodium distachyon
Bradi2g10480 0.5kb downstream 0.5kb downstream 2313 true Bd2: 8703251-8705563 Brachypodium distachyon
Bradi2g10480 0.5kb downstream 0.5kb downstream 500 false Bd2: 8703251-8703750 Brachypodium distachyon
Bradi2g10480 1.0kb upstream 1.0kb upstream 2813 true Bd2: 8703751-8706563 Brachypodium distachyon
Bradi2g10480 1.0kb upstream 1.0kb upstream 1000 false Bd2: 8705564-8706563 Brachypodium distachyon
Bradi2g10480 1.0kb downstream 1.0kb downstream 2813 true Bd2: 8702751-8705563 Brachypodium distachyon
Bradi2g10480 1.0kb downstream 1.0kb downstream 1000 false Bd2: 8702751-8703750 Brachypodium distachyon
Bradi2g10480 2.0kb upstream 2.0kb upstream 3813 true Bd2: 8703751-8707563 Brachypodium distachyon
Bradi2g10480 2.0kb upstream 2.0kb upstream 2000 false Bd2: 8705564-8707563 Brachypodium distachyon
Bradi2g10480 2.0kb downstream 2.0kb downstream 3813 true Bd2: 8701751-8705563 Brachypodium distachyon
Bradi2g10480 2.0kb downstream 2.0kb downstream 2000 false Bd2: 8701751-8703750 Brachypodium distachyon
Bradi2g10480 5.0kb upstream 5.0kb upstream 6813 true Bd2: 8703751-8710563 Brachypodium distachyon
Bradi2g10480 5.0kb upstream 5.0kb upstream 5000 false Bd2: 8705564-8710563 Brachypodium distachyon
Bradi2g10480 5.0kb downstream 5.0kb downstream 6813 true Bd2: 8698751-8705563 Brachypodium distachyon
Bradi2g10480 5.0kb downstream 5.0kb downstream 5000 false Bd2: 8698751-8703750 Brachypodium distachyon
Bradi2g10480 10.0kb upstream 10.0kb upstream 11813 true Bd2: 8703751-8715563 Brachypodium distachyon
Bradi2g10480 10.0kb upstream 10.0kb upstream 10000 false Bd2: 8705564-8715563 Brachypodium distachyon
Bradi2g10480 10.0kb downstream 10.0kb downstream 11813 true Bd2: 8693751-8705563 Brachypodium distachyon
Bradi2g10480 10.0kb downstream 10.0kb downstream 10000 false Bd2: 8693751-8703750 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581319 5269 Grass View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.871       Low
cufflinks 3.362        
cufflinks 3.981        
cufflinks 2.447        
cufflinks 1.851       Low
cufflinks 2.666        
cufflinks 3.356        
cufflinks 3.13        
cufflinks 2.822        
cufflinks 3.79        
cufflinks 2.946        
cufflinks 2.384        
cufflinks 1.705       Low
cufflinks 2.106        
cufflinks 1.205       Low
cufflinks 2.657        
cufflinks 2.267        
cufflinks 5.394       High
cufflinks 5.646       High
cufflinks 3.078        
cufflinks 5.14       High
cufflinks 3.121        
cufflinks 2.779        
cufflinks 2.361        
cufflinks 2.513        
cufflinks 3.808        
cufflinks 2.702        
cufflinks 4.248        
cufflinks 3.84        
cufflinks 4.051        

0 Strain