Gene : Bradi5g02000 B. distachyon v3.1
Genomic Order:  208 Name:  ? Bradi5g02000
Secondary Identifier:  ? PAC:32807421
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g02000 0.5kb upstream 0.5kb upstream 1498 true Bd5: 2111345-2112842 Brachypodium distachyon
Bradi5g02000 0.5kb upstream 0.5kb upstream 500 false Bd5: 2112343-2112842 Brachypodium distachyon
Bradi5g02000 0.5kb downstream 0.5kb downstream 1498 true Bd5: 2110845-2112342 Brachypodium distachyon
Bradi5g02000 0.5kb downstream 0.5kb downstream 500 false Bd5: 2110845-2111344 Brachypodium distachyon
Bradi5g02000 1.0kb upstream 1.0kb upstream 1998 true Bd5: 2111345-2113342 Brachypodium distachyon
Bradi5g02000 1.0kb upstream 1.0kb upstream 1000 false Bd5: 2112343-2113342 Brachypodium distachyon
Bradi5g02000 1.0kb downstream 1.0kb downstream 1998 true Bd5: 2110345-2112342 Brachypodium distachyon
Bradi5g02000 1.0kb downstream 1.0kb downstream 1000 false Bd5: 2110345-2111344 Brachypodium distachyon
Bradi5g02000 2.0kb upstream 2.0kb upstream 2998 true Bd5: 2111345-2114342 Brachypodium distachyon
Bradi5g02000 2.0kb upstream 2.0kb upstream 2000 false Bd5: 2112343-2114342 Brachypodium distachyon
Bradi5g02000 2.0kb downstream 2.0kb downstream 2998 true Bd5: 2109345-2112342 Brachypodium distachyon
Bradi5g02000 2.0kb downstream 2.0kb downstream 2000 false Bd5: 2109345-2111344 Brachypodium distachyon
Bradi5g02000 5.0kb upstream 5.0kb upstream 5998 true Bd5: 2111345-2117342 Brachypodium distachyon
Bradi5g02000 5.0kb upstream 5.0kb upstream 5000 false Bd5: 2112343-2117342 Brachypodium distachyon
Bradi5g02000 5.0kb downstream 5.0kb downstream 5998 true Bd5: 2106345-2112342 Brachypodium distachyon
Bradi5g02000 5.0kb downstream 5.0kb downstream 5000 false Bd5: 2106345-2111344 Brachypodium distachyon
Bradi5g02000 10.0kb upstream 10.0kb upstream 10998 true Bd5: 2111345-2122342 Brachypodium distachyon
Bradi5g02000 10.0kb upstream 10.0kb upstream 10000 false Bd5: 2112343-2122342 Brachypodium distachyon
Bradi5g02000 10.0kb downstream 10.0kb downstream 10998 true Bd5: 2101345-2112342 Brachypodium distachyon
Bradi5g02000 10.0kb downstream 10.0kb downstream 10000 false Bd5: 2101345-2111344 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121971627 5273 Angiosperm View MSA
124545119 5269 Grass View MSA
121242117 5274 Embryophyte View MSA
123280926 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.091        
cufflinks 0.062     Low  
cufflinks 0.079     Low  
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.105        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.442       High
cufflinks 0.036     Low  
cufflinks 0.051     Low  
cufflinks 0.142        
cufflinks 0.041     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.07     Low  
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.032     Low  
cufflinks 0.05     Low  
cufflinks 0.023     Low Low
cufflinks 0.076     Low  
cufflinks 0.288       High
cufflinks 0.149        
cufflinks 0.078     Low  
cufflinks 0.138        
cufflinks 0.311       High

0 Strain