Gene : Bradi2g10880 B. distachyon v3.1
Genomic Order:  1399 Name:  ? Bradi2g10880
Secondary Identifier:  ? PAC:32777327
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g10880 0.5kb upstream 0.5kb upstream 3431 true Bd2: 9106427-9109857 Brachypodium distachyon
Bradi2g10880 0.5kb upstream 0.5kb upstream 500 false Bd2: 9109358-9109857 Brachypodium distachyon
Bradi2g10880 0.5kb downstream 0.5kb downstream 3431 true Bd2: 9105927-9109357 Brachypodium distachyon
Bradi2g10880 0.5kb downstream 0.5kb downstream 500 false Bd2: 9105927-9106426 Brachypodium distachyon
Bradi2g10880 1.0kb upstream 1.0kb upstream 3931 true Bd2: 9106427-9110357 Brachypodium distachyon
Bradi2g10880 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9109358-9110357 Brachypodium distachyon
Bradi2g10880 1.0kb downstream 1.0kb downstream 3931 true Bd2: 9105427-9109357 Brachypodium distachyon
Bradi2g10880 1.0kb downstream 1.0kb downstream 1000 false Bd2: 9105427-9106426 Brachypodium distachyon
Bradi2g10880 2.0kb upstream 2.0kb upstream 4931 true Bd2: 9106427-9111357 Brachypodium distachyon
Bradi2g10880 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9109358-9111357 Brachypodium distachyon
Bradi2g10880 2.0kb downstream 2.0kb downstream 4931 true Bd2: 9104427-9109357 Brachypodium distachyon
Bradi2g10880 2.0kb downstream 2.0kb downstream 2000 false Bd2: 9104427-9106426 Brachypodium distachyon
Bradi2g10880 5.0kb upstream 5.0kb upstream 7931 true Bd2: 9106427-9114357 Brachypodium distachyon
Bradi2g10880 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9109358-9114357 Brachypodium distachyon
Bradi2g10880 5.0kb downstream 5.0kb downstream 7931 true Bd2: 9101427-9109357 Brachypodium distachyon
Bradi2g10880 5.0kb downstream 5.0kb downstream 5000 false Bd2: 9101427-9106426 Brachypodium distachyon
Bradi2g10880 10.0kb upstream 10.0kb upstream 12931 true Bd2: 9106427-9119357 Brachypodium distachyon
Bradi2g10880 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9109358-9119357 Brachypodium distachyon
Bradi2g10880 10.0kb downstream 10.0kb downstream 12931 true Bd2: 9096427-9109357 Brachypodium distachyon
Bradi2g10880 10.0kb downstream 10.0kb downstream 10000 false Bd2: 9096427-9106426 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577934 5269 Grass View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.758     High High
cufflinks 0.251        
cufflinks 0.009     Low Low
cufflinks 0.198        
cufflinks 20.504     High  
cufflinks 4.177        
cufflinks 0.846        
cufflinks 15.415     High  
cufflinks 7.713        
cufflinks 1.278        
cufflinks 13.616     High  
cufflinks 9.187     High  
cufflinks 11.806     High  
cufflinks 11.173     High  
cufflinks 33.829     High High
cufflinks 4.083        
cufflinks 13.151     High  
cufflinks 0.27        
cufflinks 1.109        
cufflinks 27.185     High High
cufflinks 4.044        
cufflinks 0.805        
cufflinks 17.087     High  
cufflinks 9.534     High  
cufflinks 4.838        
cufflinks 0.007     Low Low
cufflinks 6.229        
cufflinks 0.008     Low Low
cufflinks 0.07     Low Low
cufflinks 2.807        

0 Strain