Gene : Bradi5g02270 B. distachyon v3.1
Defline:  (1 of 4) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Genomic Order:  246
Name:  ? Bradi5g02270 Secondary Identifier:  ? PAC:32807992
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g02270 0.5kb upstream 0.5kb upstream 2149 true Bd5: 2404292-2406440 Brachypodium distachyon
Bradi5g02270 0.5kb upstream 0.5kb upstream 500 false Bd5: 2405941-2406440 Brachypodium distachyon
Bradi5g02270 0.5kb downstream 0.5kb downstream 2149 true Bd5: 2403792-2405940 Brachypodium distachyon
Bradi5g02270 0.5kb downstream 0.5kb downstream 500 false Bd5: 2403792-2404291 Brachypodium distachyon
Bradi5g02270 1.0kb upstream 1.0kb upstream 2649 true Bd5: 2404292-2406940 Brachypodium distachyon
Bradi5g02270 1.0kb upstream 1.0kb upstream 1000 false Bd5: 2405941-2406940 Brachypodium distachyon
Bradi5g02270 1.0kb downstream 1.0kb downstream 2649 true Bd5: 2403292-2405940 Brachypodium distachyon
Bradi5g02270 1.0kb downstream 1.0kb downstream 1000 false Bd5: 2403292-2404291 Brachypodium distachyon
Bradi5g02270 2.0kb upstream 2.0kb upstream 3649 true Bd5: 2404292-2407940 Brachypodium distachyon
Bradi5g02270 2.0kb upstream 2.0kb upstream 2000 false Bd5: 2405941-2407940 Brachypodium distachyon
Bradi5g02270 2.0kb downstream 2.0kb downstream 3649 true Bd5: 2402292-2405940 Brachypodium distachyon
Bradi5g02270 2.0kb downstream 2.0kb downstream 2000 false Bd5: 2402292-2404291 Brachypodium distachyon
Bradi5g02270 5.0kb upstream 5.0kb upstream 6649 true Bd5: 2404292-2410940 Brachypodium distachyon
Bradi5g02270 5.0kb upstream 5.0kb upstream 5000 false Bd5: 2405941-2410940 Brachypodium distachyon
Bradi5g02270 5.0kb downstream 5.0kb downstream 6649 true Bd5: 2399292-2405940 Brachypodium distachyon
Bradi5g02270 5.0kb downstream 5.0kb downstream 5000 false Bd5: 2399292-2404291 Brachypodium distachyon
Bradi5g02270 10.0kb upstream 10.0kb upstream 11649 true Bd5: 2404292-2415940 Brachypodium distachyon
Bradi5g02270 10.0kb upstream 10.0kb upstream 10000 false Bd5: 2405941-2415940 Brachypodium distachyon
Bradi5g02270 10.0kb downstream 10.0kb downstream 11649 true Bd5: 2394292-2405940 Brachypodium distachyon
Bradi5g02270 10.0kb downstream 10.0kb downstream 10000 false Bd5: 2394292-2404291 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580430 5269 Grass View MSA
122046311 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121346898 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.212        
cufflinks 7.169        
cufflinks 5.825        
cufflinks 6.919        
cufflinks 2.82        
cufflinks 5.236        
cufflinks 7.202        
cufflinks 3.329        
cufflinks 3.7        
cufflinks 2.865        
cufflinks 2.183        
cufflinks 4.33        
cufflinks 1.802       Low
cufflinks 1.435       Low
cufflinks 1.773       Low
cufflinks 4.302        
cufflinks 3.627        
cufflinks 34.272     High High
cufflinks 6.536        
cufflinks 1.946        
cufflinks 9.334       High
cufflinks 3.639        
cufflinks 3.179        
cufflinks 3.638        
cufflinks 4.647        
cufflinks 4.805        
cufflinks 1.562       Low
cufflinks 4.49        
cufflinks 4.183        
cufflinks 9.951       High

0 Strain