Gene : Bradi2g11410 B. distachyon v3.1
Defline:  (1 of 1) PTHR30620//PTHR30620:SF30 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1481
Name:  ? Bradi2g11410 Secondary Identifier:  ? PAC:32780273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11410 0.5kb upstream 0.5kb upstream 3506 true Bd2: 9685304-9688809 Brachypodium distachyon
Bradi2g11410 0.5kb upstream 0.5kb upstream 500 false Bd2: 9685304-9685803 Brachypodium distachyon
Bradi2g11410 0.5kb downstream 0.5kb downstream 3506 true Bd2: 9685804-9689309 Brachypodium distachyon
Bradi2g11410 0.5kb downstream 0.5kb downstream 500 false Bd2: 9688810-9689309 Brachypodium distachyon
Bradi2g11410 1.0kb upstream 1.0kb upstream 4006 true Bd2: 9684804-9688809 Brachypodium distachyon
Bradi2g11410 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9684804-9685803 Brachypodium distachyon
Bradi2g11410 1.0kb downstream 1.0kb downstream 4006 true Bd2: 9685804-9689809 Brachypodium distachyon
Bradi2g11410 1.0kb downstream 1.0kb downstream 1000 false Bd2: 9688810-9689809 Brachypodium distachyon
Bradi2g11410 2.0kb upstream 2.0kb upstream 5006 true Bd2: 9683804-9688809 Brachypodium distachyon
Bradi2g11410 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9683804-9685803 Brachypodium distachyon
Bradi2g11410 2.0kb downstream 2.0kb downstream 5006 true Bd2: 9685804-9690809 Brachypodium distachyon
Bradi2g11410 2.0kb downstream 2.0kb downstream 2000 false Bd2: 9688810-9690809 Brachypodium distachyon
Bradi2g11410 5.0kb upstream 5.0kb upstream 8006 true Bd2: 9680804-9688809 Brachypodium distachyon
Bradi2g11410 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9680804-9685803 Brachypodium distachyon
Bradi2g11410 5.0kb downstream 5.0kb downstream 8006 true Bd2: 9685804-9693809 Brachypodium distachyon
Bradi2g11410 5.0kb downstream 5.0kb downstream 5000 false Bd2: 9688810-9693809 Brachypodium distachyon
Bradi2g11410 10.0kb upstream 10.0kb upstream 13006 true Bd2: 9675804-9688809 Brachypodium distachyon
Bradi2g11410 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9675804-9685803 Brachypodium distachyon
Bradi2g11410 10.0kb downstream 10.0kb downstream 13006 true Bd2: 9685804-9698809 Brachypodium distachyon
Bradi2g11410 10.0kb downstream 10.0kb downstream 10000 false Bd2: 9688810-9698809 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570976 5269 Grass View MSA
122049455 5273 Angiosperm View MSA
121311411 5274 Embryophyte View MSA
123348711 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.664        
cufflinks 4.684        
cufflinks 5.136        
cufflinks 4.448        
cufflinks 1.159        
cufflinks 3.989        
cufflinks 3.719        
cufflinks 5.886        
cufflinks 3.371        
cufflinks 3.979        
cufflinks 0.012     Low Low
cufflinks 2.86        
cufflinks 0.165       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.936        
cufflinks 5.896        
cufflinks 3.183        
cufflinks 7.202        
cufflinks 2.787        
cufflinks 0.034     Low Low
cufflinks 1.492        
cufflinks 3.831        
cufflinks 5.401        
cufflinks 3.657        
cufflinks 2.902        
cufflinks 4.365        
cufflinks 0.033     Low Low
cufflinks 5.018        
cufflinks 4.921        
cufflinks 5.734        

0 Strain