Gene : Bradi2g11627 B. distachyon v3.1
Defline:  (1 of 2) PTHR12960 - GLE-1-RELATED Genomic Order:  1506
Name:  ? Bradi2g11627 Secondary Identifier:  ? PAC:32778643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11627 0.5kb upstream 0.5kb upstream 13604 true Bd2: 9997353-10010956 Brachypodium distachyon
Bradi2g11627 0.5kb upstream 0.5kb upstream 500 false Bd2: 9997353-9997852 Brachypodium distachyon
Bradi2g11627 0.5kb downstream 0.5kb downstream 13604 true Bd2: 9997853-10011456 Brachypodium distachyon
Bradi2g11627 0.5kb downstream 0.5kb downstream 500 false Bd2: 10010957-10011456 Brachypodium distachyon
Bradi2g11627 1.0kb upstream 1.0kb upstream 14104 true Bd2: 9996853-10010956 Brachypodium distachyon
Bradi2g11627 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9996853-9997852 Brachypodium distachyon
Bradi2g11627 1.0kb downstream 1.0kb downstream 14104 true Bd2: 9997853-10011956 Brachypodium distachyon
Bradi2g11627 1.0kb downstream 1.0kb downstream 1000 false Bd2: 10010957-10011956 Brachypodium distachyon
Bradi2g11627 2.0kb upstream 2.0kb upstream 15104 true Bd2: 9995853-10010956 Brachypodium distachyon
Bradi2g11627 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9995853-9997852 Brachypodium distachyon
Bradi2g11627 2.0kb downstream 2.0kb downstream 15104 true Bd2: 9997853-10012956 Brachypodium distachyon
Bradi2g11627 2.0kb downstream 2.0kb downstream 2000 false Bd2: 10010957-10012956 Brachypodium distachyon
Bradi2g11627 5.0kb upstream 5.0kb upstream 18104 true Bd2: 9992853-10010956 Brachypodium distachyon
Bradi2g11627 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9992853-9997852 Brachypodium distachyon
Bradi2g11627 5.0kb downstream 5.0kb downstream 18104 true Bd2: 9997853-10015956 Brachypodium distachyon
Bradi2g11627 5.0kb downstream 5.0kb downstream 5000 false Bd2: 10010957-10015956 Brachypodium distachyon
Bradi2g11627 10.0kb upstream 10.0kb upstream 23104 true Bd2: 9987853-10010956 Brachypodium distachyon
Bradi2g11627 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9987853-9997852 Brachypodium distachyon
Bradi2g11627 10.0kb downstream 10.0kb downstream 23104 true Bd2: 9997853-10020956 Brachypodium distachyon
Bradi2g11627 10.0kb downstream 10.0kb downstream 10000 false Bd2: 10010957-10020956 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576929 5269 Grass View MSA
122045266 5273 Angiosperm View MSA
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.068        
cufflinks 1.506        
cufflinks 1.461        
cufflinks 1.307        
cufflinks 0.701       Low
cufflinks 1.323        
cufflinks 1.267        
cufflinks 1.194        
cufflinks 1.313        
cufflinks 0.993        
cufflinks 1.15        
cufflinks 1.256        
cufflinks 1.196        
cufflinks 0.989        
cufflinks 1.044        
cufflinks 1.296        
cufflinks 0.932        
cufflinks 1.947       High
cufflinks 0.876        
cufflinks 0.337       Low
cufflinks 0.938        
cufflinks 1.402        
cufflinks 1.183        
cufflinks 1.2        
cufflinks 1.268        
cufflinks 1.286        
cufflinks 1.316        
cufflinks 1.279        
cufflinks 1.244        
cufflinks 1.332        

0 Strain