Gene : Bradi2g11567 B. distachyon v3.1
Defline:  (1 of 1) PTHR15371//PTHR15371:SF5 - TIM23 Genomic Order:  1499
Name:  ? Bradi2g11567 Secondary Identifier:  ? PAC:32774871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g11567 0.5kb upstream 0.5kb upstream 2608 true Bd2: 9868440-9871047 Brachypodium distachyon
Bradi2g11567 0.5kb upstream 0.5kb upstream 500 false Bd2: 9870548-9871047 Brachypodium distachyon
Bradi2g11567 0.5kb downstream 0.5kb downstream 2608 true Bd2: 9867940-9870547 Brachypodium distachyon
Bradi2g11567 0.5kb downstream 0.5kb downstream 500 false Bd2: 9867940-9868439 Brachypodium distachyon
Bradi2g11567 1.0kb upstream 1.0kb upstream 3108 true Bd2: 9868440-9871547 Brachypodium distachyon
Bradi2g11567 1.0kb upstream 1.0kb upstream 1000 false Bd2: 9870548-9871547 Brachypodium distachyon
Bradi2g11567 1.0kb downstream 1.0kb downstream 3108 true Bd2: 9867440-9870547 Brachypodium distachyon
Bradi2g11567 1.0kb downstream 1.0kb downstream 1000 false Bd2: 9867440-9868439 Brachypodium distachyon
Bradi2g11567 2.0kb upstream 2.0kb upstream 4108 true Bd2: 9868440-9872547 Brachypodium distachyon
Bradi2g11567 2.0kb upstream 2.0kb upstream 2000 false Bd2: 9870548-9872547 Brachypodium distachyon
Bradi2g11567 2.0kb downstream 2.0kb downstream 4108 true Bd2: 9866440-9870547 Brachypodium distachyon
Bradi2g11567 2.0kb downstream 2.0kb downstream 2000 false Bd2: 9866440-9868439 Brachypodium distachyon
Bradi2g11567 5.0kb upstream 5.0kb upstream 7108 true Bd2: 9868440-9875547 Brachypodium distachyon
Bradi2g11567 5.0kb upstream 5.0kb upstream 5000 false Bd2: 9870548-9875547 Brachypodium distachyon
Bradi2g11567 5.0kb downstream 5.0kb downstream 7108 true Bd2: 9863440-9870547 Brachypodium distachyon
Bradi2g11567 5.0kb downstream 5.0kb downstream 5000 false Bd2: 9863440-9868439 Brachypodium distachyon
Bradi2g11567 10.0kb upstream 10.0kb upstream 12108 true Bd2: 9868440-9880547 Brachypodium distachyon
Bradi2g11567 10.0kb upstream 10.0kb upstream 10000 false Bd2: 9870548-9880547 Brachypodium distachyon
Bradi2g11567 10.0kb downstream 10.0kb downstream 12108 true Bd2: 9858440-9870547 Brachypodium distachyon
Bradi2g11567 10.0kb downstream 10.0kb downstream 10000 false Bd2: 9858440-9868439 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581729 5269 Grass View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.591        
cufflinks 1.08        
cufflinks 1.153        
cufflinks 1.48        
cufflinks 32.438     High High
cufflinks 0.497        
cufflinks 0.943        
cufflinks 0.487        
cufflinks 0.658        
cufflinks 0.834        
cufflinks 0.057     Low Low
cufflinks 0.425        
cufflinks 0.021     Low Low
cufflinks 0.072       Low
cufflinks 0.263        
cufflinks 0.405        
cufflinks 1.419        
cufflinks 0.239        
cufflinks 94.286     High High
cufflinks 95.382     High High
cufflinks 0.535        
cufflinks 0.502        
cufflinks 1.524        
cufflinks 0.591        
cufflinks 0.866        
cufflinks 1.508        
cufflinks 0.012     Low Low
cufflinks 1.808        
cufflinks 1.321        
cufflinks 1.876        

0 Strain