Gene : Bradi2g16610 B. distachyon v3.1
Defline:  (1 of 1) PTHR31384//PTHR31384:SF5 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 3 Genomic Order:  2107
Name:  ? Bradi2g16610 Secondary Identifier:  ? PAC:32781665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g16610 0.5kb upstream 0.5kb upstream 7579 true Bd2: 14577578-14585156 Brachypodium distachyon
Bradi2g16610 0.5kb upstream 0.5kb upstream 500 false Bd2: 14584657-14585156 Brachypodium distachyon
Bradi2g16610 0.5kb downstream 0.5kb downstream 7579 true Bd2: 14577078-14584656 Brachypodium distachyon
Bradi2g16610 0.5kb downstream 0.5kb downstream 500 false Bd2: 14577078-14577577 Brachypodium distachyon
Bradi2g16610 1.0kb upstream 1.0kb upstream 8079 true Bd2: 14577578-14585656 Brachypodium distachyon
Bradi2g16610 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14584657-14585656 Brachypodium distachyon
Bradi2g16610 1.0kb downstream 1.0kb downstream 8079 true Bd2: 14576578-14584656 Brachypodium distachyon
Bradi2g16610 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14576578-14577577 Brachypodium distachyon
Bradi2g16610 2.0kb upstream 2.0kb upstream 9079 true Bd2: 14577578-14586656 Brachypodium distachyon
Bradi2g16610 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14584657-14586656 Brachypodium distachyon
Bradi2g16610 2.0kb downstream 2.0kb downstream 9079 true Bd2: 14575578-14584656 Brachypodium distachyon
Bradi2g16610 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14575578-14577577 Brachypodium distachyon
Bradi2g16610 5.0kb upstream 5.0kb upstream 12079 true Bd2: 14577578-14589656 Brachypodium distachyon
Bradi2g16610 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14584657-14589656 Brachypodium distachyon
Bradi2g16610 5.0kb downstream 5.0kb downstream 12079 true Bd2: 14572578-14584656 Brachypodium distachyon
Bradi2g16610 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14572578-14577577 Brachypodium distachyon
Bradi2g16610 10.0kb upstream 10.0kb upstream 17079 true Bd2: 14577578-14594656 Brachypodium distachyon
Bradi2g16610 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14584657-14594656 Brachypodium distachyon
Bradi2g16610 10.0kb downstream 10.0kb downstream 17079 true Bd2: 14567578-14584656 Brachypodium distachyon
Bradi2g16610 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14567578-14577577 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579390 5269 Grass View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.748       High
cufflinks 3.034       High
cufflinks 1.979        
cufflinks 2.364       High
cufflinks 0.603       Low
cufflinks 2.309       High
cufflinks 2.608       High
cufflinks 1.236        
cufflinks 1.854        
cufflinks 1.031        
cufflinks 0.761       Low
cufflinks 1.66        
cufflinks 1.022        
cufflinks 0.899        
cufflinks 1.406        
cufflinks 2.382       High
cufflinks 1.086        
cufflinks 1.266        
cufflinks 1.042        
cufflinks 0.175       Low
cufflinks 1.427        
cufflinks 1.292        
cufflinks 1.167        
cufflinks 1.641        
cufflinks 2.014        
cufflinks 1.817        
cufflinks 1.131        
cufflinks 1.429        
cufflinks 1.39        
cufflinks 2.311       High

0 Strain