Gene : Bradi5g00570 B. distachyon v3.1
Defline:  (1 of 3) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Genomic Order:  29
Name:  ? Bradi5g00570 Secondary Identifier:  ? PAC:32808094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g00570 0.5kb upstream 0.5kb upstream 3032 true Bd5: 524877-527908 Brachypodium distachyon
Bradi5g00570 0.5kb upstream 0.5kb upstream 500 false Bd5: 524877-525376 Brachypodium distachyon
Bradi5g00570 0.5kb downstream 0.5kb downstream 3032 true Bd5: 525377-528408 Brachypodium distachyon
Bradi5g00570 0.5kb downstream 0.5kb downstream 500 false Bd5: 527909-528408 Brachypodium distachyon
Bradi5g00570 1.0kb upstream 1.0kb upstream 3532 true Bd5: 524377-527908 Brachypodium distachyon
Bradi5g00570 1.0kb upstream 1.0kb upstream 1000 false Bd5: 524377-525376 Brachypodium distachyon
Bradi5g00570 1.0kb downstream 1.0kb downstream 3532 true Bd5: 525377-528908 Brachypodium distachyon
Bradi5g00570 1.0kb downstream 1.0kb downstream 1000 false Bd5: 527909-528908 Brachypodium distachyon
Bradi5g00570 2.0kb upstream 2.0kb upstream 4532 true Bd5: 523377-527908 Brachypodium distachyon
Bradi5g00570 2.0kb upstream 2.0kb upstream 2000 false Bd5: 523377-525376 Brachypodium distachyon
Bradi5g00570 2.0kb downstream 2.0kb downstream 4532 true Bd5: 525377-529908 Brachypodium distachyon
Bradi5g00570 2.0kb downstream 2.0kb downstream 2000 false Bd5: 527909-529908 Brachypodium distachyon
Bradi5g00570 5.0kb upstream 5.0kb upstream 7532 true Bd5: 520377-527908 Brachypodium distachyon
Bradi5g00570 5.0kb upstream 5.0kb upstream 5000 false Bd5: 520377-525376 Brachypodium distachyon
Bradi5g00570 5.0kb downstream 5.0kb downstream 7532 true Bd5: 525377-532908 Brachypodium distachyon
Bradi5g00570 5.0kb downstream 5.0kb downstream 5000 false Bd5: 527909-532908 Brachypodium distachyon
Bradi5g00570 10.0kb upstream 10.0kb upstream 12532 true Bd5: 515377-527908 Brachypodium distachyon
Bradi5g00570 10.0kb upstream 10.0kb upstream 10000 false Bd5: 515377-525376 Brachypodium distachyon
Bradi5g00570 10.0kb downstream 10.0kb downstream 12532 true Bd5: 525377-537908 Brachypodium distachyon
Bradi5g00570 10.0kb downstream 10.0kb downstream 10000 false Bd5: 527909-537908 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574103 5269 Grass View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.066       High
cufflinks 4.269        
cufflinks 3.72        
cufflinks 4.547        
cufflinks 4.583        
cufflinks 3.444        
cufflinks 3.658        
cufflinks 4.703        
cufflinks 4.379        
cufflinks 2.634       Low
cufflinks 3.467        
cufflinks 5.149        
cufflinks 3.172       Low
cufflinks 2.994       Low
cufflinks 7.5       High
cufflinks 3.899        
cufflinks 5.666        
cufflinks 7.772       High
cufflinks 9.105       High
cufflinks 3.416        
cufflinks 7.472       High
cufflinks 3.425        
cufflinks 4.447        
cufflinks 4.229        
cufflinks 3.142       Low
cufflinks 3.841        
cufflinks 3.646        
cufflinks 3.487        
cufflinks 2.841       Low
cufflinks 6.643       High

0 Strain