Gene : Bradi2g17220 B. distachyon v3.1
Defline:  (1 of 1) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  2196
Name:  ? Bradi2g17220 Secondary Identifier:  ? PAC:32777580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17220 0.5kb upstream 0.5kb upstream 3347 true Bd2: 15344755-15348101 Brachypodium distachyon
Bradi2g17220 0.5kb upstream 0.5kb upstream 500 false Bd2: 15347602-15348101 Brachypodium distachyon
Bradi2g17220 0.5kb downstream 0.5kb downstream 3347 true Bd2: 15344255-15347601 Brachypodium distachyon
Bradi2g17220 0.5kb downstream 0.5kb downstream 500 false Bd2: 15344255-15344754 Brachypodium distachyon
Bradi2g17220 1.0kb upstream 1.0kb upstream 3847 true Bd2: 15344755-15348601 Brachypodium distachyon
Bradi2g17220 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15347602-15348601 Brachypodium distachyon
Bradi2g17220 1.0kb downstream 1.0kb downstream 3847 true Bd2: 15343755-15347601 Brachypodium distachyon
Bradi2g17220 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15343755-15344754 Brachypodium distachyon
Bradi2g17220 2.0kb upstream 2.0kb upstream 4847 true Bd2: 15344755-15349601 Brachypodium distachyon
Bradi2g17220 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15347602-15349601 Brachypodium distachyon
Bradi2g17220 2.0kb downstream 2.0kb downstream 4847 true Bd2: 15342755-15347601 Brachypodium distachyon
Bradi2g17220 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15342755-15344754 Brachypodium distachyon
Bradi2g17220 5.0kb upstream 5.0kb upstream 7847 true Bd2: 15344755-15352601 Brachypodium distachyon
Bradi2g17220 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15347602-15352601 Brachypodium distachyon
Bradi2g17220 5.0kb downstream 5.0kb downstream 7847 true Bd2: 15339755-15347601 Brachypodium distachyon
Bradi2g17220 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15339755-15344754 Brachypodium distachyon
Bradi2g17220 10.0kb upstream 10.0kb upstream 12847 true Bd2: 15344755-15357601 Brachypodium distachyon
Bradi2g17220 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15347602-15357601 Brachypodium distachyon
Bradi2g17220 10.0kb downstream 10.0kb downstream 12847 true Bd2: 15334755-15347601 Brachypodium distachyon
Bradi2g17220 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15334755-15344754 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574251 5269 Grass View MSA
122041727 5273 Angiosperm View MSA
121346994 5274 Embryophyte View MSA
123425280 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.617       Low
cufflinks 4.601        
cufflinks 5.347        
cufflinks 7.13        
cufflinks 25.741     High High
cufflinks 3.99        
cufflinks 3.85        
cufflinks 3.517        
cufflinks 3.621        
cufflinks 3.745        
cufflinks 3.731        
cufflinks 3.14        
cufflinks 1.693       Low
cufflinks 2.115       Low
cufflinks 2.298       Low
cufflinks 3.244        
cufflinks 5.112        
cufflinks 5.874        
cufflinks 8.657        
cufflinks 8.094        
cufflinks 7.751        
cufflinks 3.57        
cufflinks 3.937        
cufflinks 3.839        
cufflinks 5.225        
cufflinks 5.037        
cufflinks 2.11       Low
cufflinks 4.8        
cufflinks 3.605        
cufflinks 6.265        

0 Strain