Gene : Bradi2g17192 B. distachyon v3.1
Defline:  (1 of 2) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  2191
Name:  ? Bradi2g17192 Secondary Identifier:  ? PAC:32777660
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLUGLNSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-3282 Brachypodium distachyon pathologic  
Bdistachyon PWY-6963 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17192 0.5kb upstream 0.5kb upstream 11961 true Bd2: 15307917-15319877 Brachypodium distachyon
Bradi2g17192 0.5kb upstream 0.5kb upstream 500 false Bd2: 15319378-15319877 Brachypodium distachyon
Bradi2g17192 0.5kb downstream 0.5kb downstream 11961 true Bd2: 15307417-15319377 Brachypodium distachyon
Bradi2g17192 0.5kb downstream 0.5kb downstream 500 false Bd2: 15307417-15307916 Brachypodium distachyon
Bradi2g17192 1.0kb upstream 1.0kb upstream 12461 true Bd2: 15307917-15320377 Brachypodium distachyon
Bradi2g17192 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15319378-15320377 Brachypodium distachyon
Bradi2g17192 1.0kb downstream 1.0kb downstream 12461 true Bd2: 15306917-15319377 Brachypodium distachyon
Bradi2g17192 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15306917-15307916 Brachypodium distachyon
Bradi2g17192 2.0kb upstream 2.0kb upstream 13461 true Bd2: 15307917-15321377 Brachypodium distachyon
Bradi2g17192 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15319378-15321377 Brachypodium distachyon
Bradi2g17192 2.0kb downstream 2.0kb downstream 13461 true Bd2: 15305917-15319377 Brachypodium distachyon
Bradi2g17192 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15305917-15307916 Brachypodium distachyon
Bradi2g17192 5.0kb upstream 5.0kb upstream 16461 true Bd2: 15307917-15324377 Brachypodium distachyon
Bradi2g17192 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15319378-15324377 Brachypodium distachyon
Bradi2g17192 5.0kb downstream 5.0kb downstream 16461 true Bd2: 15302917-15319377 Brachypodium distachyon
Bradi2g17192 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15302917-15307916 Brachypodium distachyon
Bradi2g17192 10.0kb upstream 10.0kb upstream 21461 true Bd2: 15307917-15329377 Brachypodium distachyon
Bradi2g17192 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15319378-15329377 Brachypodium distachyon
Bradi2g17192 10.0kb downstream 10.0kb downstream 21461 true Bd2: 15297917-15319377 Brachypodium distachyon
Bradi2g17192 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15297917-15307916 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993114 5273 Angiosperm View MSA
124575023 5269 Grass View MSA
121263420 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.722        
cufflinks 5.163       High
cufflinks 4.424       High
cufflinks 3.054        
cufflinks 0.255       Low
cufflinks 3.493        
cufflinks 3.856        
cufflinks 1.469        
cufflinks 1.885        
cufflinks 1.295        
cufflinks 1.007        
cufflinks 3.329        
cufflinks 1.3        
cufflinks 0.657        
cufflinks 0.595        
cufflinks 3.841        
cufflinks 0.646        
cufflinks 0.499        
cufflinks 0.418        
cufflinks 0.033     Low Low
cufflinks 0.733        
cufflinks 3.019        
cufflinks 1.39        
cufflinks 1.551        
cufflinks 2.416        
cufflinks 3.576        
cufflinks 0.422        
cufflinks 2.847        
cufflinks 2.799        
cufflinks 3.352        

0 Strain