Gene : Bradi2g17180 B. distachyon v3.1
Defline:  (1 of 1) PTHR10902//PTHR10902:SF4 - 60S RIBOSOMAL PROTEIN L35A // SUBFAMILY NOT NAMED Genomic Order:  2188
Name:  ? Bradi2g17180 Secondary Identifier:  ? PAC:32775160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17180 0.5kb upstream 0.5kb upstream 2883 true Bd2: 15297791-15300673 Brachypodium distachyon
Bradi2g17180 0.5kb upstream 0.5kb upstream 500 false Bd2: 15300174-15300673 Brachypodium distachyon
Bradi2g17180 0.5kb downstream 0.5kb downstream 2883 true Bd2: 15297291-15300173 Brachypodium distachyon
Bradi2g17180 0.5kb downstream 0.5kb downstream 500 false Bd2: 15297291-15297790 Brachypodium distachyon
Bradi2g17180 1.0kb upstream 1.0kb upstream 3383 true Bd2: 15297791-15301173 Brachypodium distachyon
Bradi2g17180 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15300174-15301173 Brachypodium distachyon
Bradi2g17180 1.0kb downstream 1.0kb downstream 3383 true Bd2: 15296791-15300173 Brachypodium distachyon
Bradi2g17180 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15296791-15297790 Brachypodium distachyon
Bradi2g17180 2.0kb upstream 2.0kb upstream 4383 true Bd2: 15297791-15302173 Brachypodium distachyon
Bradi2g17180 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15300174-15302173 Brachypodium distachyon
Bradi2g17180 2.0kb downstream 2.0kb downstream 4383 true Bd2: 15295791-15300173 Brachypodium distachyon
Bradi2g17180 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15295791-15297790 Brachypodium distachyon
Bradi2g17180 5.0kb upstream 5.0kb upstream 7383 true Bd2: 15297791-15305173 Brachypodium distachyon
Bradi2g17180 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15300174-15305173 Brachypodium distachyon
Bradi2g17180 5.0kb downstream 5.0kb downstream 7383 true Bd2: 15292791-15300173 Brachypodium distachyon
Bradi2g17180 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15292791-15297790 Brachypodium distachyon
Bradi2g17180 10.0kb upstream 10.0kb upstream 12383 true Bd2: 15297791-15310173 Brachypodium distachyon
Bradi2g17180 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15300174-15310173 Brachypodium distachyon
Bradi2g17180 10.0kb downstream 10.0kb downstream 12383 true Bd2: 15287791-15300173 Brachypodium distachyon
Bradi2g17180 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15287791-15297790 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589102 5269 Grass View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.922     High  
cufflinks 18.505     High  
cufflinks 15.213     High  
cufflinks 20.766     High  
cufflinks 12.432     High  
cufflinks 16.499     High  
cufflinks 20.116     High  
cufflinks 14.264     High  
cufflinks 15.896     High  
cufflinks 17.169     High  
cufflinks 2.931       Low
cufflinks 11.391     High  
cufflinks 2.205       Low
cufflinks 2.474       Low
cufflinks 6.098        
cufflinks 16.14     High  
cufflinks 20.291     High  
cufflinks 24.225     High High
cufflinks 15.803     High  
cufflinks 4.435       Low
cufflinks 21.115     High  
cufflinks 13.244     High  
cufflinks 14.75     High  
cufflinks 13.881     High  
cufflinks 20.722     High  
cufflinks 14.442     High  
cufflinks 3.093       Low
cufflinks 15.912     High  
cufflinks 15.263     High  
cufflinks 21.789     High  

0 Strain