Gene : Bradi2g17390 B. distachyon v3.1
Defline:  (1 of 1) PTHR31846:SF4 - CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN Genomic Order:  2216
Name:  ? Bradi2g17390 Secondary Identifier:  ? PAC:32770847
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g17390 0.5kb upstream 0.5kb upstream 5857 true Bd2: 15438534-15444390 Brachypodium distachyon
Bradi2g17390 0.5kb upstream 0.5kb upstream 500 false Bd2: 15438534-15439033 Brachypodium distachyon
Bradi2g17390 0.5kb downstream 0.5kb downstream 5857 true Bd2: 15439034-15444890 Brachypodium distachyon
Bradi2g17390 0.5kb downstream 0.5kb downstream 500 false Bd2: 15444391-15444890 Brachypodium distachyon
Bradi2g17390 1.0kb upstream 1.0kb upstream 6357 true Bd2: 15438034-15444390 Brachypodium distachyon
Bradi2g17390 1.0kb upstream 1.0kb upstream 1000 false Bd2: 15438034-15439033 Brachypodium distachyon
Bradi2g17390 1.0kb downstream 1.0kb downstream 6357 true Bd2: 15439034-15445390 Brachypodium distachyon
Bradi2g17390 1.0kb downstream 1.0kb downstream 1000 false Bd2: 15444391-15445390 Brachypodium distachyon
Bradi2g17390 2.0kb upstream 2.0kb upstream 7357 true Bd2: 15437034-15444390 Brachypodium distachyon
Bradi2g17390 2.0kb upstream 2.0kb upstream 2000 false Bd2: 15437034-15439033 Brachypodium distachyon
Bradi2g17390 2.0kb downstream 2.0kb downstream 7357 true Bd2: 15439034-15446390 Brachypodium distachyon
Bradi2g17390 2.0kb downstream 2.0kb downstream 2000 false Bd2: 15444391-15446390 Brachypodium distachyon
Bradi2g17390 5.0kb upstream 5.0kb upstream 10357 true Bd2: 15434034-15444390 Brachypodium distachyon
Bradi2g17390 5.0kb upstream 5.0kb upstream 5000 false Bd2: 15434034-15439033 Brachypodium distachyon
Bradi2g17390 5.0kb downstream 5.0kb downstream 10357 true Bd2: 15439034-15449390 Brachypodium distachyon
Bradi2g17390 5.0kb downstream 5.0kb downstream 5000 false Bd2: 15444391-15449390 Brachypodium distachyon
Bradi2g17390 10.0kb upstream 10.0kb upstream 15357 true Bd2: 15429034-15444390 Brachypodium distachyon
Bradi2g17390 10.0kb upstream 10.0kb upstream 10000 false Bd2: 15429034-15439033 Brachypodium distachyon
Bradi2g17390 10.0kb downstream 10.0kb downstream 15357 true Bd2: 15439034-15454390 Brachypodium distachyon
Bradi2g17390 10.0kb downstream 10.0kb downstream 10000 false Bd2: 15444391-15454390 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574102 5269 Grass View MSA
122048016 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.075        
cufflinks 29.396     High High
cufflinks 17.704     High High
cufflinks 20.078     High High
cufflinks 3.038       Low
cufflinks 12.599     High  
cufflinks 20.516     High High
cufflinks 4.434        
cufflinks 5.961        
cufflinks 5.889        
cufflinks 7.983        
cufflinks 9.882     High  
cufflinks 5.615        
cufflinks 5.048        
cufflinks 3.899        
cufflinks 15.788     High High
cufflinks 5.661        
cufflinks 5.139        
cufflinks 11.319        
cufflinks 1.934       Low
cufflinks 7.562        
cufflinks 9.372        
cufflinks 3.839       Low
cufflinks 4.964        
cufflinks 11.093     High  
cufflinks 13.96     High  
cufflinks 5.608        
cufflinks 11.218     High  
cufflinks 9.847        
cufflinks 15.607     High High

0 Strain