Gene : Bradi2g18250 B. distachyon v3.1
Defline:  (1 of 1) K11324 - DNA methyltransferase 1-associated protein 1 (DMAP1, SWC4, EAF2) Genomic Order:  2330
Name:  ? Bradi2g18250 Secondary Identifier:  ? PAC:32772257
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g18250 0.5kb upstream 0.5kb upstream 6936 true Bd2: 16157717-16164652 Brachypodium distachyon
Bradi2g18250 0.5kb upstream 0.5kb upstream 500 false Bd2: 16164153-16164652 Brachypodium distachyon
Bradi2g18250 0.5kb downstream 0.5kb downstream 6936 true Bd2: 16157217-16164152 Brachypodium distachyon
Bradi2g18250 0.5kb downstream 0.5kb downstream 500 false Bd2: 16157217-16157716 Brachypodium distachyon
Bradi2g18250 1.0kb upstream 1.0kb upstream 7436 true Bd2: 16157717-16165152 Brachypodium distachyon
Bradi2g18250 1.0kb upstream 1.0kb upstream 1000 false Bd2: 16164153-16165152 Brachypodium distachyon
Bradi2g18250 1.0kb downstream 1.0kb downstream 7436 true Bd2: 16156717-16164152 Brachypodium distachyon
Bradi2g18250 1.0kb downstream 1.0kb downstream 1000 false Bd2: 16156717-16157716 Brachypodium distachyon
Bradi2g18250 2.0kb upstream 2.0kb upstream 8436 true Bd2: 16157717-16166152 Brachypodium distachyon
Bradi2g18250 2.0kb upstream 2.0kb upstream 2000 false Bd2: 16164153-16166152 Brachypodium distachyon
Bradi2g18250 2.0kb downstream 2.0kb downstream 8436 true Bd2: 16155717-16164152 Brachypodium distachyon
Bradi2g18250 2.0kb downstream 2.0kb downstream 2000 false Bd2: 16155717-16157716 Brachypodium distachyon
Bradi2g18250 5.0kb upstream 5.0kb upstream 11436 true Bd2: 16157717-16169152 Brachypodium distachyon
Bradi2g18250 5.0kb upstream 5.0kb upstream 5000 false Bd2: 16164153-16169152 Brachypodium distachyon
Bradi2g18250 5.0kb downstream 5.0kb downstream 11436 true Bd2: 16152717-16164152 Brachypodium distachyon
Bradi2g18250 5.0kb downstream 5.0kb downstream 5000 false Bd2: 16152717-16157716 Brachypodium distachyon
Bradi2g18250 10.0kb upstream 10.0kb upstream 16436 true Bd2: 16157717-16174152 Brachypodium distachyon
Bradi2g18250 10.0kb upstream 10.0kb upstream 10000 false Bd2: 16164153-16174152 Brachypodium distachyon
Bradi2g18250 10.0kb downstream 10.0kb downstream 16436 true Bd2: 16147717-16164152 Brachypodium distachyon
Bradi2g18250 10.0kb downstream 10.0kb downstream 10000 false Bd2: 16147717-16157716 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580157 5269 Grass View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.894        
cufflinks 6.166       High
cufflinks 6.094       High
cufflinks 5.69        
cufflinks 3.963       Low
cufflinks 5.218        
cufflinks 5.556        
cufflinks 5.374        
cufflinks 5.878        
cufflinks 5.075        
cufflinks 4.086       Low
cufflinks 4.3        
cufflinks 4.056       Low
cufflinks 3.704       Low
cufflinks 4.027       Low
cufflinks 5.281        
cufflinks 5.266        
cufflinks 5.775        
cufflinks 7.068       High
cufflinks 5.266        
cufflinks 4.565        
cufflinks 5.742        
cufflinks 5.324        
cufflinks 4.933        
cufflinks 5.282        
cufflinks 5.82        
cufflinks 4.842        
cufflinks 5.668        
cufflinks 5.418        
cufflinks 4.445        

0 Strain