Gene : Bradi2g18290 B. distachyon v3.1
Defline:  (1 of 1) PTHR11081//PTHR11081:SF9 - XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILY // FLAP ENDONUCLEASE 1 Genomic Order:  2334
Name:  ? Bradi2g18290 Secondary Identifier:  ? PAC:32782467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g18290 0.5kb upstream 0.5kb upstream 4931 true Bd2: 16181397-16186327 Brachypodium distachyon
Bradi2g18290 0.5kb upstream 0.5kb upstream 500 false Bd2: 16181397-16181896 Brachypodium distachyon
Bradi2g18290 0.5kb downstream 0.5kb downstream 4931 true Bd2: 16181897-16186827 Brachypodium distachyon
Bradi2g18290 0.5kb downstream 0.5kb downstream 500 false Bd2: 16186328-16186827 Brachypodium distachyon
Bradi2g18290 1.0kb upstream 1.0kb upstream 5431 true Bd2: 16180897-16186327 Brachypodium distachyon
Bradi2g18290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 16180897-16181896 Brachypodium distachyon
Bradi2g18290 1.0kb downstream 1.0kb downstream 5431 true Bd2: 16181897-16187327 Brachypodium distachyon
Bradi2g18290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 16186328-16187327 Brachypodium distachyon
Bradi2g18290 2.0kb upstream 2.0kb upstream 6431 true Bd2: 16179897-16186327 Brachypodium distachyon
Bradi2g18290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 16179897-16181896 Brachypodium distachyon
Bradi2g18290 2.0kb downstream 2.0kb downstream 6431 true Bd2: 16181897-16188327 Brachypodium distachyon
Bradi2g18290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 16186328-16188327 Brachypodium distachyon
Bradi2g18290 5.0kb upstream 5.0kb upstream 9431 true Bd2: 16176897-16186327 Brachypodium distachyon
Bradi2g18290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 16176897-16181896 Brachypodium distachyon
Bradi2g18290 5.0kb downstream 5.0kb downstream 9431 true Bd2: 16181897-16191327 Brachypodium distachyon
Bradi2g18290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 16186328-16191327 Brachypodium distachyon
Bradi2g18290 10.0kb upstream 10.0kb upstream 14431 true Bd2: 16171897-16186327 Brachypodium distachyon
Bradi2g18290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 16171897-16181896 Brachypodium distachyon
Bradi2g18290 10.0kb downstream 10.0kb downstream 14431 true Bd2: 16181897-16196327 Brachypodium distachyon
Bradi2g18290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 16186328-16196327 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568841 5269 Grass View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.045        
cufflinks 4.899        
cufflinks 5.665        
cufflinks 5.907        
cufflinks 2.728        
cufflinks 4.205        
cufflinks 4.193        
cufflinks 3.78        
cufflinks 4.251        
cufflinks 5.783        
cufflinks 1.78       Low
cufflinks 3.106        
cufflinks 1.016       Low
cufflinks 1.26       Low
cufflinks 1.505       Low
cufflinks 3.751        
cufflinks 4.213        
cufflinks 8.573       High
cufflinks 5.045        
cufflinks 1.338       Low
cufflinks 6.441        
cufflinks 5.146        
cufflinks 3.667        
cufflinks 3.71        
cufflinks 5.127        
cufflinks 6.516        
cufflinks 2.581        
cufflinks 5.858        
cufflinks 5.167        
cufflinks 5.294        

0 Strain