Gene : Bradi2g13760 B. distachyon v3.1
Defline:  (1 of 1) PF07544 - RNA polymerase II transcription mediator complex subunit 9 (Med9) Genomic Order:  1790
Name:  ? Bradi2g13760 Secondary Identifier:  ? PAC:32777517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g13760 0.5kb upstream 0.5kb upstream 6992 true Bd2: 12350044-12357035 Brachypodium distachyon
Bradi2g13760 0.5kb upstream 0.5kb upstream 500 false Bd2: 12350044-12350543 Brachypodium distachyon
Bradi2g13760 0.5kb downstream 0.5kb downstream 6992 true Bd2: 12350544-12357535 Brachypodium distachyon
Bradi2g13760 0.5kb downstream 0.5kb downstream 500 false Bd2: 12357036-12357535 Brachypodium distachyon
Bradi2g13760 1.0kb upstream 1.0kb upstream 7492 true Bd2: 12349544-12357035 Brachypodium distachyon
Bradi2g13760 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12349544-12350543 Brachypodium distachyon
Bradi2g13760 1.0kb downstream 1.0kb downstream 7492 true Bd2: 12350544-12358035 Brachypodium distachyon
Bradi2g13760 1.0kb downstream 1.0kb downstream 1000 false Bd2: 12357036-12358035 Brachypodium distachyon
Bradi2g13760 2.0kb upstream 2.0kb upstream 8492 true Bd2: 12348544-12357035 Brachypodium distachyon
Bradi2g13760 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12348544-12350543 Brachypodium distachyon
Bradi2g13760 2.0kb downstream 2.0kb downstream 8492 true Bd2: 12350544-12359035 Brachypodium distachyon
Bradi2g13760 2.0kb downstream 2.0kb downstream 2000 false Bd2: 12357036-12359035 Brachypodium distachyon
Bradi2g13760 5.0kb upstream 5.0kb upstream 11492 true Bd2: 12345544-12357035 Brachypodium distachyon
Bradi2g13760 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12345544-12350543 Brachypodium distachyon
Bradi2g13760 5.0kb downstream 5.0kb downstream 11492 true Bd2: 12350544-12362035 Brachypodium distachyon
Bradi2g13760 5.0kb downstream 5.0kb downstream 5000 false Bd2: 12357036-12362035 Brachypodium distachyon
Bradi2g13760 10.0kb upstream 10.0kb upstream 16492 true Bd2: 12340544-12357035 Brachypodium distachyon
Bradi2g13760 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12340544-12350543 Brachypodium distachyon
Bradi2g13760 10.0kb downstream 10.0kb downstream 16492 true Bd2: 12350544-12367035 Brachypodium distachyon
Bradi2g13760 10.0kb downstream 10.0kb downstream 10000 false Bd2: 12357036-12367035 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569730 5269 Grass View MSA
122049257 5273 Angiosperm View MSA
121349503 5274 Embryophyte View MSA
123381335 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.772        
cufflinks 0.701        
cufflinks 0.744        
cufflinks 0.641        
cufflinks 0.56        
cufflinks 0.577        
cufflinks 0.716        
cufflinks 0.611        
cufflinks 0.62        
cufflinks 0.826        
cufflinks 0.622        
cufflinks 0.5        
cufflinks 0.488        
cufflinks 0.513        
cufflinks 0.365       Low
cufflinks 0.698        
cufflinks 1.004       High
cufflinks 0.966        
cufflinks 1.542       High
cufflinks 0.69        
cufflinks 0.969        
cufflinks 0.888        
cufflinks 0.548        
cufflinks 0.608        
cufflinks 0.699        
cufflinks 0.825        
cufflinks 0.517        
cufflinks 0.934        
cufflinks 0.89        
cufflinks 0.662        

0 Strain