Gene : Bradi2g14160 B. distachyon v3.1
Defline:  (1 of 1) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  1824
Name:  ? Bradi2g14160 Secondary Identifier:  ? PAC:32772848
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14160 0.5kb upstream 0.5kb upstream 11195 true Bd2: 12814850-12826044 Brachypodium distachyon
Bradi2g14160 0.5kb upstream 0.5kb upstream 500 false Bd2: 12814850-12815349 Brachypodium distachyon
Bradi2g14160 0.5kb downstream 0.5kb downstream 11195 true Bd2: 12815350-12826544 Brachypodium distachyon
Bradi2g14160 0.5kb downstream 0.5kb downstream 500 false Bd2: 12826045-12826544 Brachypodium distachyon
Bradi2g14160 1.0kb upstream 1.0kb upstream 11695 true Bd2: 12814350-12826044 Brachypodium distachyon
Bradi2g14160 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12814350-12815349 Brachypodium distachyon
Bradi2g14160 1.0kb downstream 1.0kb downstream 11695 true Bd2: 12815350-12827044 Brachypodium distachyon
Bradi2g14160 1.0kb downstream 1.0kb downstream 1000 false Bd2: 12826045-12827044 Brachypodium distachyon
Bradi2g14160 2.0kb upstream 2.0kb upstream 12695 true Bd2: 12813350-12826044 Brachypodium distachyon
Bradi2g14160 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12813350-12815349 Brachypodium distachyon
Bradi2g14160 2.0kb downstream 2.0kb downstream 12695 true Bd2: 12815350-12828044 Brachypodium distachyon
Bradi2g14160 2.0kb downstream 2.0kb downstream 2000 false Bd2: 12826045-12828044 Brachypodium distachyon
Bradi2g14160 5.0kb upstream 5.0kb upstream 15695 true Bd2: 12810350-12826044 Brachypodium distachyon
Bradi2g14160 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12810350-12815349 Brachypodium distachyon
Bradi2g14160 5.0kb downstream 5.0kb downstream 15695 true Bd2: 12815350-12831044 Brachypodium distachyon
Bradi2g14160 5.0kb downstream 5.0kb downstream 5000 false Bd2: 12826045-12831044 Brachypodium distachyon
Bradi2g14160 10.0kb upstream 10.0kb upstream 20695 true Bd2: 12805350-12826044 Brachypodium distachyon
Bradi2g14160 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12805350-12815349 Brachypodium distachyon
Bradi2g14160 10.0kb downstream 10.0kb downstream 20695 true Bd2: 12815350-12836044 Brachypodium distachyon
Bradi2g14160 10.0kb downstream 10.0kb downstream 10000 false Bd2: 12826045-12836044 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578772 5269 Grass View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.194        
cufflinks 0.517       High
cufflinks 0.532       High
cufflinks 0.383        
cufflinks 0.096       Low
cufflinks 0.435        
cufflinks 0.363        
cufflinks 0.343        
cufflinks 0.433        
cufflinks 0.208        
cufflinks 0.221        
cufflinks 0.357        
cufflinks 0.099       Low
cufflinks 0.118        
cufflinks 0.078       Low
cufflinks 0.423        
cufflinks 0.178        
cufflinks 0.694       High
cufflinks 0.179     Low  
cufflinks 0.076     Low Low
cufflinks 0.199        
cufflinks 0.498        
cufflinks 0.297        
cufflinks 0.274        
cufflinks 0.361        
cufflinks 0.357        
cufflinks 0.152        
cufflinks 0.332        
cufflinks 0.365        
cufflinks 0.387        

0 Strain