Gene : Bradi2g14260 B. distachyon v3.1
Defline:  (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) Genomic Order:  1834
Name:  ? Bradi2g14260 Secondary Identifier:  ? PAC:32772227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14260 0.5kb upstream 0.5kb upstream 2905 true Bd2: 12863638-12866542 Brachypodium distachyon
Bradi2g14260 0.5kb upstream 0.5kb upstream 500 false Bd2: 12866043-12866542 Brachypodium distachyon
Bradi2g14260 0.5kb downstream 0.5kb downstream 2905 true Bd2: 12863138-12866042 Brachypodium distachyon
Bradi2g14260 0.5kb downstream 0.5kb downstream 500 false Bd2: 12863138-12863637 Brachypodium distachyon
Bradi2g14260 1.0kb upstream 1.0kb upstream 3405 true Bd2: 12863638-12867042 Brachypodium distachyon
Bradi2g14260 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12866043-12867042 Brachypodium distachyon
Bradi2g14260 1.0kb downstream 1.0kb downstream 3405 true Bd2: 12862638-12866042 Brachypodium distachyon
Bradi2g14260 1.0kb downstream 1.0kb downstream 1000 false Bd2: 12862638-12863637 Brachypodium distachyon
Bradi2g14260 2.0kb upstream 2.0kb upstream 4405 true Bd2: 12863638-12868042 Brachypodium distachyon
Bradi2g14260 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12866043-12868042 Brachypodium distachyon
Bradi2g14260 2.0kb downstream 2.0kb downstream 4405 true Bd2: 12861638-12866042 Brachypodium distachyon
Bradi2g14260 2.0kb downstream 2.0kb downstream 2000 false Bd2: 12861638-12863637 Brachypodium distachyon
Bradi2g14260 5.0kb upstream 5.0kb upstream 7405 true Bd2: 12863638-12871042 Brachypodium distachyon
Bradi2g14260 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12866043-12871042 Brachypodium distachyon
Bradi2g14260 5.0kb downstream 5.0kb downstream 7405 true Bd2: 12858638-12866042 Brachypodium distachyon
Bradi2g14260 5.0kb downstream 5.0kb downstream 5000 false Bd2: 12858638-12863637 Brachypodium distachyon
Bradi2g14260 10.0kb upstream 10.0kb upstream 12405 true Bd2: 12863638-12876042 Brachypodium distachyon
Bradi2g14260 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12866043-12876042 Brachypodium distachyon
Bradi2g14260 10.0kb downstream 10.0kb downstream 12405 true Bd2: 12853638-12866042 Brachypodium distachyon
Bradi2g14260 10.0kb downstream 10.0kb downstream 10000 false Bd2: 12853638-12863637 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580941 5269 Grass View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.203     High  
cufflinks 9.963        
cufflinks 9.509        
cufflinks 12.742     High  
cufflinks 7.893        
cufflinks 8.834        
cufflinks 8.825        
cufflinks 7.207        
cufflinks 8.894        
cufflinks 14.565     High  
cufflinks 3.272       Low
cufflinks 6.758        
cufflinks 2.529       Low
cufflinks 3.367       Low
cufflinks 6.454        
cufflinks 7.082        
cufflinks 15.38     High  
cufflinks 13.62     High  
cufflinks 11.067        
cufflinks 7.33        
cufflinks 20.41     High High
cufflinks 7.058        
cufflinks 7.05        
cufflinks 7.004        
cufflinks 11.415     High  
cufflinks 14.735     High  
cufflinks 3.048       Low
cufflinks 14.389     High  
cufflinks 11.454     High  
cufflinks 14.268     High  

0 Strain