Gene : Bradi2g14330 B. distachyon v3.1
Defline:  (1 of 3) K08955 - ATP-dependent metalloprotease [EC:3.4.24.-] (YME1) Genomic Order:  1842
Name:  ? Bradi2g14330 Secondary Identifier:  ? PAC:32771550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14330 0.5kb upstream 0.5kb upstream 5098 true Bd2: 12905072-12910169 Brachypodium distachyon
Bradi2g14330 0.5kb upstream 0.5kb upstream 500 false Bd2: 12905072-12905571 Brachypodium distachyon
Bradi2g14330 0.5kb downstream 0.5kb downstream 5098 true Bd2: 12905572-12910669 Brachypodium distachyon
Bradi2g14330 0.5kb downstream 0.5kb downstream 500 false Bd2: 12910170-12910669 Brachypodium distachyon
Bradi2g14330 1.0kb upstream 1.0kb upstream 5598 true Bd2: 12904572-12910169 Brachypodium distachyon
Bradi2g14330 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12904572-12905571 Brachypodium distachyon
Bradi2g14330 1.0kb downstream 1.0kb downstream 5598 true Bd2: 12905572-12911169 Brachypodium distachyon
Bradi2g14330 1.0kb downstream 1.0kb downstream 1000 false Bd2: 12910170-12911169 Brachypodium distachyon
Bradi2g14330 2.0kb upstream 2.0kb upstream 6598 true Bd2: 12903572-12910169 Brachypodium distachyon
Bradi2g14330 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12903572-12905571 Brachypodium distachyon
Bradi2g14330 2.0kb downstream 2.0kb downstream 6598 true Bd2: 12905572-12912169 Brachypodium distachyon
Bradi2g14330 2.0kb downstream 2.0kb downstream 2000 false Bd2: 12910170-12912169 Brachypodium distachyon
Bradi2g14330 5.0kb upstream 5.0kb upstream 9598 true Bd2: 12900572-12910169 Brachypodium distachyon
Bradi2g14330 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12900572-12905571 Brachypodium distachyon
Bradi2g14330 5.0kb downstream 5.0kb downstream 9598 true Bd2: 12905572-12915169 Brachypodium distachyon
Bradi2g14330 5.0kb downstream 5.0kb downstream 5000 false Bd2: 12910170-12915169 Brachypodium distachyon
Bradi2g14330 10.0kb upstream 10.0kb upstream 14598 true Bd2: 12895572-12910169 Brachypodium distachyon
Bradi2g14330 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12895572-12905571 Brachypodium distachyon
Bradi2g14330 10.0kb downstream 10.0kb downstream 14598 true Bd2: 12905572-12920169 Brachypodium distachyon
Bradi2g14330 10.0kb downstream 10.0kb downstream 10000 false Bd2: 12910170-12920169 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583717 5269 Grass View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.48        
cufflinks 10.061       High
cufflinks 4.25        
cufflinks 5.998        
cufflinks 1.641       Low
cufflinks 9.022       High
cufflinks 9.541       High
cufflinks 4.095        
cufflinks 7.183        
cufflinks 1.493       Low
cufflinks 6.021        
cufflinks 7.644        
cufflinks 5.619        
cufflinks 5.475        
cufflinks 3.005        
cufflinks 8.414        
cufflinks 3.669        
cufflinks 10.723       High
cufflinks 2.272       Low
cufflinks 0.935       Low
cufflinks 5.302        
cufflinks 3.27        
cufflinks 3.963        
cufflinks 6.871        
cufflinks 7.476        
cufflinks 3.532        
cufflinks 8.29        
cufflinks 3.217        
cufflinks 2.878        
cufflinks 8.169        

0 Strain