Gene : Bradi2g14375 B. distachyon v3.1
Defline:  (1 of 2) PTHR10799//PTHR10799:SF698 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  1851
Name:  ? Bradi2g14375 Secondary Identifier:  ? PAC:32777896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14375 0.5kb upstream 0.5kb upstream 12913 true Bd2: 12965362-12978274 Brachypodium distachyon
Bradi2g14375 0.5kb upstream 0.5kb upstream 500 false Bd2: 12965362-12965861 Brachypodium distachyon
Bradi2g14375 0.5kb downstream 0.5kb downstream 12913 true Bd2: 12965862-12978774 Brachypodium distachyon
Bradi2g14375 0.5kb downstream 0.5kb downstream 500 false Bd2: 12978275-12978774 Brachypodium distachyon
Bradi2g14375 1.0kb upstream 1.0kb upstream 13413 true Bd2: 12964862-12978274 Brachypodium distachyon
Bradi2g14375 1.0kb upstream 1.0kb upstream 1000 false Bd2: 12964862-12965861 Brachypodium distachyon
Bradi2g14375 1.0kb downstream 1.0kb downstream 13413 true Bd2: 12965862-12979274 Brachypodium distachyon
Bradi2g14375 1.0kb downstream 1.0kb downstream 1000 false Bd2: 12978275-12979274 Brachypodium distachyon
Bradi2g14375 2.0kb upstream 2.0kb upstream 14413 true Bd2: 12963862-12978274 Brachypodium distachyon
Bradi2g14375 2.0kb upstream 2.0kb upstream 2000 false Bd2: 12963862-12965861 Brachypodium distachyon
Bradi2g14375 2.0kb downstream 2.0kb downstream 14413 true Bd2: 12965862-12980274 Brachypodium distachyon
Bradi2g14375 2.0kb downstream 2.0kb downstream 2000 false Bd2: 12978275-12980274 Brachypodium distachyon
Bradi2g14375 5.0kb upstream 5.0kb upstream 17413 true Bd2: 12960862-12978274 Brachypodium distachyon
Bradi2g14375 5.0kb upstream 5.0kb upstream 5000 false Bd2: 12960862-12965861 Brachypodium distachyon
Bradi2g14375 5.0kb downstream 5.0kb downstream 17413 true Bd2: 12965862-12983274 Brachypodium distachyon
Bradi2g14375 5.0kb downstream 5.0kb downstream 5000 false Bd2: 12978275-12983274 Brachypodium distachyon
Bradi2g14375 10.0kb upstream 10.0kb upstream 22413 true Bd2: 12955862-12978274 Brachypodium distachyon
Bradi2g14375 10.0kb upstream 10.0kb upstream 10000 false Bd2: 12955862-12965861 Brachypodium distachyon
Bradi2g14375 10.0kb downstream 10.0kb downstream 22413 true Bd2: 12965862-12988274 Brachypodium distachyon
Bradi2g14375 10.0kb downstream 10.0kb downstream 10000 false Bd2: 12978275-12988274 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
124581278 5269 Grass View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.955        
cufflinks 10.282     High  
cufflinks 10.465     High  
cufflinks 5.905        
cufflinks 1.923       Low
cufflinks 9.494     High  
cufflinks 8.783        
cufflinks 7.762        
cufflinks 9.554     High  
cufflinks 4.55        
cufflinks 10.29     High  
cufflinks 9.625     High  
cufflinks 8.968     High  
cufflinks 6.16        
cufflinks 4.16        
cufflinks 9.531     High  
cufflinks 2.584       Low
cufflinks 10.402        
cufflinks 3.606        
cufflinks 2.219       Low
cufflinks 3.236        
cufflinks 12.204     High High
cufflinks 7.542        
cufflinks 6.366        
cufflinks 5.831        
cufflinks 8.818        
cufflinks 9.036     High  
cufflinks 8.539        
cufflinks 8.405        
cufflinks 7.294        

0 Strain