Gene : Bradi2g14530 B. distachyon v3.1
Defline:  (1 of 3) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  1870
Name:  ? Bradi2g14530 Secondary Identifier:  ? PAC:32773280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14530 0.5kb upstream 0.5kb upstream 4416 true Bd2: 13114917-13119332 Brachypodium distachyon
Bradi2g14530 0.5kb upstream 0.5kb upstream 500 false Bd2: 13114917-13115416 Brachypodium distachyon
Bradi2g14530 0.5kb downstream 0.5kb downstream 4416 true Bd2: 13115417-13119832 Brachypodium distachyon
Bradi2g14530 0.5kb downstream 0.5kb downstream 500 false Bd2: 13119333-13119832 Brachypodium distachyon
Bradi2g14530 1.0kb upstream 1.0kb upstream 4916 true Bd2: 13114417-13119332 Brachypodium distachyon
Bradi2g14530 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13114417-13115416 Brachypodium distachyon
Bradi2g14530 1.0kb downstream 1.0kb downstream 4916 true Bd2: 13115417-13120332 Brachypodium distachyon
Bradi2g14530 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13119333-13120332 Brachypodium distachyon
Bradi2g14530 2.0kb upstream 2.0kb upstream 5916 true Bd2: 13113417-13119332 Brachypodium distachyon
Bradi2g14530 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13113417-13115416 Brachypodium distachyon
Bradi2g14530 2.0kb downstream 2.0kb downstream 5916 true Bd2: 13115417-13121332 Brachypodium distachyon
Bradi2g14530 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13119333-13121332 Brachypodium distachyon
Bradi2g14530 5.0kb upstream 5.0kb upstream 8916 true Bd2: 13110417-13119332 Brachypodium distachyon
Bradi2g14530 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13110417-13115416 Brachypodium distachyon
Bradi2g14530 5.0kb downstream 5.0kb downstream 8916 true Bd2: 13115417-13124332 Brachypodium distachyon
Bradi2g14530 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13119333-13124332 Brachypodium distachyon
Bradi2g14530 10.0kb upstream 10.0kb upstream 13916 true Bd2: 13105417-13119332 Brachypodium distachyon
Bradi2g14530 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13105417-13115416 Brachypodium distachyon
Bradi2g14530 10.0kb downstream 10.0kb downstream 13916 true Bd2: 13115417-13129332 Brachypodium distachyon
Bradi2g14530 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13119333-13129332 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582167 5269 Grass View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.662       Low
cufflinks 1.758        
cufflinks 2.449       High
cufflinks 1.816        
cufflinks 1.282        
cufflinks 1.779        
cufflinks 1.624        
cufflinks 1.611        
cufflinks 1.951        
cufflinks 1.184        
cufflinks 0.916        
cufflinks 1.767        
cufflinks 0.892        
cufflinks 0.496       Low
cufflinks 1.329        
cufflinks 1.359        
cufflinks 1.15        
cufflinks 3.625       High
cufflinks 1.697        
cufflinks 0.416       Low
cufflinks 2.748       High
cufflinks 1.913        
cufflinks 1.411        
cufflinks 1.431        
cufflinks 1.337        
cufflinks 1.669        
cufflinks 1.293        
cufflinks 1.578        
cufflinks 1.342        
cufflinks 3.309       High

0 Strain