Gene : Bradi2g14540 B. distachyon v3.1
Defline:  (1 of 1) PTHR12299//PTHR12299:SF26 - HYALURONIC ACID-BINDING PROTEIN 4 Genomic Order:  1871
Name:  ? Bradi2g14540 Secondary Identifier:  ? PAC:32776852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g14540 0.5kb upstream 0.5kb upstream 3991 true Bd2: 13119824-13123814 Brachypodium distachyon
Bradi2g14540 0.5kb upstream 0.5kb upstream 500 false Bd2: 13123315-13123814 Brachypodium distachyon
Bradi2g14540 0.5kb downstream 0.5kb downstream 3991 true Bd2: 13119324-13123314 Brachypodium distachyon
Bradi2g14540 0.5kb downstream 0.5kb downstream 500 false Bd2: 13119324-13119823 Brachypodium distachyon
Bradi2g14540 1.0kb upstream 1.0kb upstream 4491 true Bd2: 13119824-13124314 Brachypodium distachyon
Bradi2g14540 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13123315-13124314 Brachypodium distachyon
Bradi2g14540 1.0kb downstream 1.0kb downstream 4491 true Bd2: 13118824-13123314 Brachypodium distachyon
Bradi2g14540 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13118824-13119823 Brachypodium distachyon
Bradi2g14540 2.0kb upstream 2.0kb upstream 5491 true Bd2: 13119824-13125314 Brachypodium distachyon
Bradi2g14540 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13123315-13125314 Brachypodium distachyon
Bradi2g14540 2.0kb downstream 2.0kb downstream 5491 true Bd2: 13117824-13123314 Brachypodium distachyon
Bradi2g14540 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13117824-13119823 Brachypodium distachyon
Bradi2g14540 5.0kb upstream 5.0kb upstream 8491 true Bd2: 13119824-13128314 Brachypodium distachyon
Bradi2g14540 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13123315-13128314 Brachypodium distachyon
Bradi2g14540 5.0kb downstream 5.0kb downstream 8491 true Bd2: 13114824-13123314 Brachypodium distachyon
Bradi2g14540 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13114824-13119823 Brachypodium distachyon
Bradi2g14540 10.0kb upstream 10.0kb upstream 13491 true Bd2: 13119824-13133314 Brachypodium distachyon
Bradi2g14540 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13123315-13133314 Brachypodium distachyon
Bradi2g14540 10.0kb downstream 10.0kb downstream 13491 true Bd2: 13109824-13123314 Brachypodium distachyon
Bradi2g14540 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13109824-13119823 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578178 5269 Grass View MSA
122042476 5273 Angiosperm View MSA
121348767 5274 Embryophyte View MSA
123425134 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.115     High  
cufflinks 22.94     High  
cufflinks 19.893     High  
cufflinks 19.034     High  
cufflinks 8.693        
cufflinks 19.876     High  
cufflinks 21.946     High  
cufflinks 16.242     High  
cufflinks 19.093     High  
cufflinks 12.949     High  
cufflinks 6.055       Low
cufflinks 16.834     High  
cufflinks 3.851       Low
cufflinks 4.633       Low
cufflinks 7.868        
cufflinks 21.708     High  
cufflinks 19.587     High  
cufflinks 42.055     High High
cufflinks 20.763     High  
cufflinks 2.211       Low
cufflinks 20.86     High  
cufflinks 16.925     High  
cufflinks 16.001     High  
cufflinks 14.935     High  
cufflinks 19.661     High  
cufflinks 15.498     High  
cufflinks 5.573       Low
cufflinks 13.383     High  
cufflinks 14.404     High  
cufflinks 29.914     High High

0 Strain