Gene : Bradi2g15290 B. distachyon v3.1
Defline:  (1 of 3) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1946
Name:  ? Bradi2g15290 Secondary Identifier:  ? PAC:32779586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15290 0.5kb upstream 0.5kb upstream 2556 true Bd2: 13660431-13662986 Brachypodium distachyon
Bradi2g15290 0.5kb upstream 0.5kb upstream 500 false Bd2: 13662487-13662986 Brachypodium distachyon
Bradi2g15290 0.5kb downstream 0.5kb downstream 2556 true Bd2: 13659931-13662486 Brachypodium distachyon
Bradi2g15290 0.5kb downstream 0.5kb downstream 500 false Bd2: 13659931-13660430 Brachypodium distachyon
Bradi2g15290 1.0kb upstream 1.0kb upstream 3056 true Bd2: 13660431-13663486 Brachypodium distachyon
Bradi2g15290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13662487-13663486 Brachypodium distachyon
Bradi2g15290 1.0kb downstream 1.0kb downstream 3056 true Bd2: 13659431-13662486 Brachypodium distachyon
Bradi2g15290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13659431-13660430 Brachypodium distachyon
Bradi2g15290 2.0kb upstream 2.0kb upstream 4056 true Bd2: 13660431-13664486 Brachypodium distachyon
Bradi2g15290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13662487-13664486 Brachypodium distachyon
Bradi2g15290 2.0kb downstream 2.0kb downstream 4056 true Bd2: 13658431-13662486 Brachypodium distachyon
Bradi2g15290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13658431-13660430 Brachypodium distachyon
Bradi2g15290 5.0kb upstream 5.0kb upstream 7056 true Bd2: 13660431-13667486 Brachypodium distachyon
Bradi2g15290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13662487-13667486 Brachypodium distachyon
Bradi2g15290 5.0kb downstream 5.0kb downstream 7056 true Bd2: 13655431-13662486 Brachypodium distachyon
Bradi2g15290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13655431-13660430 Brachypodium distachyon
Bradi2g15290 10.0kb upstream 10.0kb upstream 12056 true Bd2: 13660431-13672486 Brachypodium distachyon
Bradi2g15290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13662487-13672486 Brachypodium distachyon
Bradi2g15290 10.0kb downstream 10.0kb downstream 12056 true Bd2: 13650431-13662486 Brachypodium distachyon
Bradi2g15290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13650431-13660430 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586096 5269 Grass View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.412       High
cufflinks 0.596       Low
cufflinks 0.602       Low
cufflinks 0.516       Low
cufflinks 1.033        
cufflinks 2.234        
cufflinks 1.311        
cufflinks 3.094        
cufflinks 3.647        
cufflinks 0.731        
cufflinks 0.933        
cufflinks 3.748        
cufflinks 1.609        
cufflinks 2.182        
cufflinks 13.958     High High
cufflinks 1.443        
cufflinks 2.856        
cufflinks 1.273        
cufflinks 0.939        
cufflinks 2.095        
cufflinks 2.345        
cufflinks 0.492       Low
cufflinks 4.805        
cufflinks 5.744       High
cufflinks 3.209        
cufflinks 0.682       Low
cufflinks 7.043       High
cufflinks 0.595       Low
cufflinks 0.83        
cufflinks 2.031        

0 Strain