Gene : Bradi2g15520 B. distachyon v3.1
Defline:  (1 of 1) PTHR24349//PTHR24349:SF95 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 3 Genomic Order:  1968
Name:  ? Bradi2g15520 Secondary Identifier:  ? PAC:32779511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15520 0.5kb upstream 0.5kb upstream 4502 true Bd2: 13781850-13786351 Brachypodium distachyon
Bradi2g15520 0.5kb upstream 0.5kb upstream 500 false Bd2: 13785852-13786351 Brachypodium distachyon
Bradi2g15520 0.5kb downstream 0.5kb downstream 4502 true Bd2: 13781350-13785851 Brachypodium distachyon
Bradi2g15520 0.5kb downstream 0.5kb downstream 500 false Bd2: 13781350-13781849 Brachypodium distachyon
Bradi2g15520 1.0kb upstream 1.0kb upstream 5002 true Bd2: 13781850-13786851 Brachypodium distachyon
Bradi2g15520 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13785852-13786851 Brachypodium distachyon
Bradi2g15520 1.0kb downstream 1.0kb downstream 5002 true Bd2: 13780850-13785851 Brachypodium distachyon
Bradi2g15520 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13780850-13781849 Brachypodium distachyon
Bradi2g15520 2.0kb upstream 2.0kb upstream 6002 true Bd2: 13781850-13787851 Brachypodium distachyon
Bradi2g15520 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13785852-13787851 Brachypodium distachyon
Bradi2g15520 2.0kb downstream 2.0kb downstream 6002 true Bd2: 13779850-13785851 Brachypodium distachyon
Bradi2g15520 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13779850-13781849 Brachypodium distachyon
Bradi2g15520 5.0kb upstream 5.0kb upstream 9002 true Bd2: 13781850-13790851 Brachypodium distachyon
Bradi2g15520 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13785852-13790851 Brachypodium distachyon
Bradi2g15520 5.0kb downstream 5.0kb downstream 9002 true Bd2: 13776850-13785851 Brachypodium distachyon
Bradi2g15520 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13776850-13781849 Brachypodium distachyon
Bradi2g15520 10.0kb upstream 10.0kb upstream 14002 true Bd2: 13781850-13795851 Brachypodium distachyon
Bradi2g15520 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13785852-13795851 Brachypodium distachyon
Bradi2g15520 10.0kb downstream 10.0kb downstream 14002 true Bd2: 13771850-13785851 Brachypodium distachyon
Bradi2g15520 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13771850-13781849 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575273 5269 Grass View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.278        
cufflinks 4.21        
cufflinks 4.297        
cufflinks 4.024        
cufflinks 6.112        
cufflinks 3.178        
cufflinks 3.455        
cufflinks 4.279        
cufflinks 2.978        
cufflinks 3.148        
cufflinks 8.244       High
cufflinks 6.941        
cufflinks 2.14       Low
cufflinks 3.062        
cufflinks 7.537       High
cufflinks 3.784        
cufflinks 2.891        
cufflinks 9.126       High
cufflinks 12.77       High
cufflinks 11.191     High High
cufflinks 4.905        
cufflinks 3.726        
cufflinks 3.74        
cufflinks 2.751        
cufflinks 3.175        
cufflinks 4.659        
cufflinks 3.195        
cufflinks 4.745        
cufflinks 3.141        
cufflinks 5.683        

0 Strain