Gene : Bradi2g15790 B. distachyon v3.1
Defline:  (1 of 2) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  2000
Name:  ? Bradi2g15790 Secondary Identifier:  ? PAC:32777644
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon BRANCHED-CHAIN-AA-SYN-PWY Brachypodium distachyon pathologic  
Bdistachyon ILEUSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-3001 Brachypodium distachyon pathologic  
Bdistachyon VALSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15790 0.5kb upstream 0.5kb upstream 4465 true Bd2: 13946294-13950758 Brachypodium distachyon
Bradi2g15790 0.5kb upstream 0.5kb upstream 500 false Bd2: 13946294-13946793 Brachypodium distachyon
Bradi2g15790 0.5kb downstream 0.5kb downstream 4465 true Bd2: 13946794-13951258 Brachypodium distachyon
Bradi2g15790 0.5kb downstream 0.5kb downstream 500 false Bd2: 13950759-13951258 Brachypodium distachyon
Bradi2g15790 1.0kb upstream 1.0kb upstream 4965 true Bd2: 13945794-13950758 Brachypodium distachyon
Bradi2g15790 1.0kb upstream 1.0kb upstream 1000 false Bd2: 13945794-13946793 Brachypodium distachyon
Bradi2g15790 1.0kb downstream 1.0kb downstream 4965 true Bd2: 13946794-13951758 Brachypodium distachyon
Bradi2g15790 1.0kb downstream 1.0kb downstream 1000 false Bd2: 13950759-13951758 Brachypodium distachyon
Bradi2g15790 2.0kb upstream 2.0kb upstream 5965 true Bd2: 13944794-13950758 Brachypodium distachyon
Bradi2g15790 2.0kb upstream 2.0kb upstream 2000 false Bd2: 13944794-13946793 Brachypodium distachyon
Bradi2g15790 2.0kb downstream 2.0kb downstream 5965 true Bd2: 13946794-13952758 Brachypodium distachyon
Bradi2g15790 2.0kb downstream 2.0kb downstream 2000 false Bd2: 13950759-13952758 Brachypodium distachyon
Bradi2g15790 5.0kb upstream 5.0kb upstream 8965 true Bd2: 13941794-13950758 Brachypodium distachyon
Bradi2g15790 5.0kb upstream 5.0kb upstream 5000 false Bd2: 13941794-13946793 Brachypodium distachyon
Bradi2g15790 5.0kb downstream 5.0kb downstream 8965 true Bd2: 13946794-13955758 Brachypodium distachyon
Bradi2g15790 5.0kb downstream 5.0kb downstream 5000 false Bd2: 13950759-13955758 Brachypodium distachyon
Bradi2g15790 10.0kb upstream 10.0kb upstream 13965 true Bd2: 13936794-13950758 Brachypodium distachyon
Bradi2g15790 10.0kb upstream 10.0kb upstream 10000 false Bd2: 13936794-13946793 Brachypodium distachyon
Bradi2g15790 10.0kb downstream 10.0kb downstream 13965 true Bd2: 13946794-13960758 Brachypodium distachyon
Bradi2g15790 10.0kb downstream 10.0kb downstream 10000 false Bd2: 13950759-13960758 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580502 5269 Grass View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.059     High  
cufflinks 163.097     High High
cufflinks 168.067     High High
cufflinks 148.605     High  
cufflinks 103.597     High  
cufflinks 153.664     High High
cufflinks 155.697     High High
cufflinks 110.936     High  
cufflinks 134.06     High  
cufflinks 80.854     High Low
cufflinks 150.705     High  
cufflinks 139.141     High  
cufflinks 116.387     High  
cufflinks 115.9     High  
cufflinks 114.751     High  
cufflinks 160.492     High High
cufflinks 123.566     High  
cufflinks 149.809     High  
cufflinks 93.495     High  
cufflinks 45.042     High Low
cufflinks 78.814     High Low
cufflinks 113.582     High  
cufflinks 109.297     High  
cufflinks 130.089     High  
cufflinks 131.253     High  
cufflinks 124.234     High  
cufflinks 59.126     High Low
cufflinks 110.975     High  
cufflinks 106.621     High  
cufflinks 112.178     High  

0 Strain