Gene : Bradi2g15950 B. distachyon v3.1
Defline:  (1 of 1) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  2022
Name:  ? Bradi2g15950 Secondary Identifier:  ? PAC:32780551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15950 0.5kb upstream 0.5kb upstream 3280 true Bd2: 14075333-14078612 Brachypodium distachyon
Bradi2g15950 0.5kb upstream 0.5kb upstream 500 false Bd2: 14078113-14078612 Brachypodium distachyon
Bradi2g15950 0.5kb downstream 0.5kb downstream 3280 true Bd2: 14074833-14078112 Brachypodium distachyon
Bradi2g15950 0.5kb downstream 0.5kb downstream 500 false Bd2: 14074833-14075332 Brachypodium distachyon
Bradi2g15950 1.0kb upstream 1.0kb upstream 3780 true Bd2: 14075333-14079112 Brachypodium distachyon
Bradi2g15950 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14078113-14079112 Brachypodium distachyon
Bradi2g15950 1.0kb downstream 1.0kb downstream 3780 true Bd2: 14074333-14078112 Brachypodium distachyon
Bradi2g15950 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14074333-14075332 Brachypodium distachyon
Bradi2g15950 2.0kb upstream 2.0kb upstream 4780 true Bd2: 14075333-14080112 Brachypodium distachyon
Bradi2g15950 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14078113-14080112 Brachypodium distachyon
Bradi2g15950 2.0kb downstream 2.0kb downstream 4780 true Bd2: 14073333-14078112 Brachypodium distachyon
Bradi2g15950 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14073333-14075332 Brachypodium distachyon
Bradi2g15950 5.0kb upstream 5.0kb upstream 7780 true Bd2: 14075333-14083112 Brachypodium distachyon
Bradi2g15950 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14078113-14083112 Brachypodium distachyon
Bradi2g15950 5.0kb downstream 5.0kb downstream 7780 true Bd2: 14070333-14078112 Brachypodium distachyon
Bradi2g15950 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14070333-14075332 Brachypodium distachyon
Bradi2g15950 10.0kb upstream 10.0kb upstream 12780 true Bd2: 14075333-14088112 Brachypodium distachyon
Bradi2g15950 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14078113-14088112 Brachypodium distachyon
Bradi2g15950 10.0kb downstream 10.0kb downstream 12780 true Bd2: 14065333-14078112 Brachypodium distachyon
Bradi2g15950 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14065333-14075332 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582930 5269 Grass View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.146        
cufflinks 4.811        
cufflinks 4.123        
cufflinks 8.358        
cufflinks 4.202        
cufflinks 4.283        
cufflinks 4.851        
cufflinks 4.371        
cufflinks 3.455        
cufflinks 12.225     High High
cufflinks 1.356       Low
cufflinks 2.156       Low
cufflinks 1.715       Low
cufflinks 2.285       Low
cufflinks 3.889        
cufflinks 3.681        
cufflinks 9.051        
cufflinks 1.523       Low
cufflinks 6.58        
cufflinks 10.95       High
cufflinks 6.782        
cufflinks 4.143        
cufflinks 4.871        
cufflinks 4.649        
cufflinks 6.78        
cufflinks 7.535        
cufflinks 1.518       Low
cufflinks 8.646        
cufflinks 8.836        
cufflinks 4.751        

0 Strain