Gene : Bradi2g15980 B. distachyon v3.1
Defline:  (1 of 1) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC Genomic Order:  2027
Name:  ? Bradi2g15980 Secondary Identifier:  ? PAC:32780277
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g15980 0.5kb upstream 0.5kb upstream 4278 true Bd2: 14106284-14110561 Brachypodium distachyon
Bradi2g15980 0.5kb upstream 0.5kb upstream 500 false Bd2: 14106284-14106783 Brachypodium distachyon
Bradi2g15980 0.5kb downstream 0.5kb downstream 4278 true Bd2: 14106784-14111061 Brachypodium distachyon
Bradi2g15980 0.5kb downstream 0.5kb downstream 500 false Bd2: 14110562-14111061 Brachypodium distachyon
Bradi2g15980 1.0kb upstream 1.0kb upstream 4778 true Bd2: 14105784-14110561 Brachypodium distachyon
Bradi2g15980 1.0kb upstream 1.0kb upstream 1000 false Bd2: 14105784-14106783 Brachypodium distachyon
Bradi2g15980 1.0kb downstream 1.0kb downstream 4778 true Bd2: 14106784-14111561 Brachypodium distachyon
Bradi2g15980 1.0kb downstream 1.0kb downstream 1000 false Bd2: 14110562-14111561 Brachypodium distachyon
Bradi2g15980 2.0kb upstream 2.0kb upstream 5778 true Bd2: 14104784-14110561 Brachypodium distachyon
Bradi2g15980 2.0kb upstream 2.0kb upstream 2000 false Bd2: 14104784-14106783 Brachypodium distachyon
Bradi2g15980 2.0kb downstream 2.0kb downstream 5778 true Bd2: 14106784-14112561 Brachypodium distachyon
Bradi2g15980 2.0kb downstream 2.0kb downstream 2000 false Bd2: 14110562-14112561 Brachypodium distachyon
Bradi2g15980 5.0kb upstream 5.0kb upstream 8778 true Bd2: 14101784-14110561 Brachypodium distachyon
Bradi2g15980 5.0kb upstream 5.0kb upstream 5000 false Bd2: 14101784-14106783 Brachypodium distachyon
Bradi2g15980 5.0kb downstream 5.0kb downstream 8778 true Bd2: 14106784-14115561 Brachypodium distachyon
Bradi2g15980 5.0kb downstream 5.0kb downstream 5000 false Bd2: 14110562-14115561 Brachypodium distachyon
Bradi2g15980 10.0kb upstream 10.0kb upstream 13778 true Bd2: 14096784-14110561 Brachypodium distachyon
Bradi2g15980 10.0kb upstream 10.0kb upstream 10000 false Bd2: 14096784-14106783 Brachypodium distachyon
Bradi2g15980 10.0kb downstream 10.0kb downstream 13778 true Bd2: 14106784-14120561 Brachypodium distachyon
Bradi2g15980 10.0kb downstream 10.0kb downstream 10000 false Bd2: 14110562-14120561 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575748 5269 Grass View MSA
122046956 5273 Angiosperm View MSA
121350502 5274 Embryophyte View MSA
123427247 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.653     High  
cufflinks 22.578     High  
cufflinks 32.144     High  
cufflinks 28.862     High  
cufflinks 42.083     High  
cufflinks 22.772     High  
cufflinks 20.585     High  
cufflinks 29.335     High  
cufflinks 26.404     High  
cufflinks 39.297     High  
cufflinks 49.11     High  
cufflinks 28.808     High  
cufflinks 37.261     High  
cufflinks 44.362     High  
cufflinks 35.874     High  
cufflinks 24.827     High  
cufflinks 34.426     High  
cufflinks 3.078       Low
cufflinks 18.785     High  
cufflinks 28.815     High  
cufflinks 19.955     High  
cufflinks 33.277     High  
cufflinks 30.387     High  
cufflinks 27.94     High  
cufflinks 24.055     High  
cufflinks 39.512     High  
cufflinks 49.434     High  
cufflinks 36.57     High  
cufflinks 38.279     High  
cufflinks 15.331     High Low

0 Strain