Gene : Bradi4g29060 B. distachyon v3.1
Defline:  (1 of 1) PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Genomic Order:  3731
Name:  ? Bradi4g29060 Secondary Identifier:  ? PAC:32787849
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29060 0.5kb upstream 0.5kb upstream 8087 true Bd4: 34382189-34390275 Brachypodium distachyon
Bradi4g29060 0.5kb upstream 0.5kb upstream 500 false Bd4: 34389776-34390275 Brachypodium distachyon
Bradi4g29060 0.5kb downstream 0.5kb downstream 8087 true Bd4: 34381689-34389775 Brachypodium distachyon
Bradi4g29060 0.5kb downstream 0.5kb downstream 500 false Bd4: 34381689-34382188 Brachypodium distachyon
Bradi4g29060 1.0kb upstream 1.0kb upstream 8587 true Bd4: 34382189-34390775 Brachypodium distachyon
Bradi4g29060 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34389776-34390775 Brachypodium distachyon
Bradi4g29060 1.0kb downstream 1.0kb downstream 8587 true Bd4: 34381189-34389775 Brachypodium distachyon
Bradi4g29060 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34381189-34382188 Brachypodium distachyon
Bradi4g29060 2.0kb upstream 2.0kb upstream 9587 true Bd4: 34382189-34391775 Brachypodium distachyon
Bradi4g29060 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34389776-34391775 Brachypodium distachyon
Bradi4g29060 2.0kb downstream 2.0kb downstream 9587 true Bd4: 34380189-34389775 Brachypodium distachyon
Bradi4g29060 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34380189-34382188 Brachypodium distachyon
Bradi4g29060 5.0kb upstream 5.0kb upstream 12587 true Bd4: 34382189-34394775 Brachypodium distachyon
Bradi4g29060 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34389776-34394775 Brachypodium distachyon
Bradi4g29060 5.0kb downstream 5.0kb downstream 12587 true Bd4: 34377189-34389775 Brachypodium distachyon
Bradi4g29060 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34377189-34382188 Brachypodium distachyon
Bradi4g29060 10.0kb upstream 10.0kb upstream 17587 true Bd4: 34382189-34399775 Brachypodium distachyon
Bradi4g29060 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34389776-34399775 Brachypodium distachyon
Bradi4g29060 10.0kb downstream 10.0kb downstream 17587 true Bd4: 34372189-34389775 Brachypodium distachyon
Bradi4g29060 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34372189-34382188 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579872 5269 Grass View MSA
122046621 5273 Angiosperm View MSA
121343822 5274 Embryophyte View MSA
123427619 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.459        
cufflinks 0.616        
cufflinks 0.505        
cufflinks 0.606        
cufflinks 0.306        
cufflinks 0.525        
cufflinks 0.512        
cufflinks 0.638        
cufflinks 0.573        
cufflinks 0.556        
cufflinks 0.302       Low
cufflinks 0.696        
cufflinks 0.382        
cufflinks 0.289       Low
cufflinks 0.65        
cufflinks 0.509        
cufflinks 0.752       High
cufflinks 0.796       High
cufflinks 0.663        
cufflinks 0.081     Low Low
cufflinks 0.669        
cufflinks 0.544        
cufflinks 0.573        
cufflinks 0.632        
cufflinks 0.527        
cufflinks 0.595        
cufflinks 0.389        
cufflinks 0.413        
cufflinks 0.491        
cufflinks 0.719        

0 Strain