Gene : Bradi2g21150 B. distachyon v3.1
Defline:  (1 of 1) PTHR11728//PTHR11728:SF14 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  2692
Name:  ? Bradi2g21150 Secondary Identifier:  ? PAC:32773261
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6118 Brachypodium distachyon pathologic  
Bdistachyon PWY-7411 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21150 0.5kb upstream 0.5kb upstream 4301 true Bd2: 18507761-18512061 Brachypodium distachyon
Bradi2g21150 0.5kb upstream 0.5kb upstream 500 false Bd2: 18511562-18512061 Brachypodium distachyon
Bradi2g21150 0.5kb downstream 0.5kb downstream 4301 true Bd2: 18507261-18511561 Brachypodium distachyon
Bradi2g21150 0.5kb downstream 0.5kb downstream 500 false Bd2: 18507261-18507760 Brachypodium distachyon
Bradi2g21150 1.0kb upstream 1.0kb upstream 4801 true Bd2: 18507761-18512561 Brachypodium distachyon
Bradi2g21150 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18511562-18512561 Brachypodium distachyon
Bradi2g21150 1.0kb downstream 1.0kb downstream 4801 true Bd2: 18506761-18511561 Brachypodium distachyon
Bradi2g21150 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18506761-18507760 Brachypodium distachyon
Bradi2g21150 2.0kb upstream 2.0kb upstream 5801 true Bd2: 18507761-18513561 Brachypodium distachyon
Bradi2g21150 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18511562-18513561 Brachypodium distachyon
Bradi2g21150 2.0kb downstream 2.0kb downstream 5801 true Bd2: 18505761-18511561 Brachypodium distachyon
Bradi2g21150 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18505761-18507760 Brachypodium distachyon
Bradi2g21150 5.0kb upstream 5.0kb upstream 8801 true Bd2: 18507761-18516561 Brachypodium distachyon
Bradi2g21150 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18511562-18516561 Brachypodium distachyon
Bradi2g21150 5.0kb downstream 5.0kb downstream 8801 true Bd2: 18502761-18511561 Brachypodium distachyon
Bradi2g21150 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18502761-18507760 Brachypodium distachyon
Bradi2g21150 10.0kb upstream 10.0kb upstream 13801 true Bd2: 18507761-18521561 Brachypodium distachyon
Bradi2g21150 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18511562-18521561 Brachypodium distachyon
Bradi2g21150 10.0kb downstream 10.0kb downstream 13801 true Bd2: 18497761-18511561 Brachypodium distachyon
Bradi2g21150 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18497761-18507760 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993588 5273 Angiosperm View MSA
124579945 5269 Grass View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.42        
cufflinks 2.619        
cufflinks 3.081        
cufflinks 2.181        
cufflinks 14.497     High High
cufflinks 2.239        
cufflinks 2.538        
cufflinks 3.241        
cufflinks 2.339        
cufflinks 1.765        
cufflinks 1.676        
cufflinks 7.604       High
cufflinks 0.556       Low
cufflinks 0.432       Low
cufflinks 2.52        
cufflinks 2.432        
cufflinks 2.158        
cufflinks 4.339        
cufflinks 8.318       High
cufflinks 10.555       High
cufflinks 2.804        
cufflinks 3.033        
cufflinks 2.644        
cufflinks 2.5        
cufflinks 2.1        
cufflinks 2.781        
cufflinks 0.171       Low
cufflinks 2.487        
cufflinks 2.847        
cufflinks 9.443       High

0 Strain