Gene : Bradi2g21197 B. distachyon v3.1
Defline:  (1 of 4) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  2703
Name:  ? Bradi2g21197 Secondary Identifier:  ? PAC:32782774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21197 0.5kb upstream 0.5kb upstream 2619 true Bd2: 18581315-18583933 Brachypodium distachyon
Bradi2g21197 0.5kb upstream 0.5kb upstream 500 false Bd2: 18581315-18581814 Brachypodium distachyon
Bradi2g21197 0.5kb downstream 0.5kb downstream 2619 true Bd2: 18581815-18584433 Brachypodium distachyon
Bradi2g21197 0.5kb downstream 0.5kb downstream 500 false Bd2: 18583934-18584433 Brachypodium distachyon
Bradi2g21197 1.0kb upstream 1.0kb upstream 3119 true Bd2: 18580815-18583933 Brachypodium distachyon
Bradi2g21197 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18580815-18581814 Brachypodium distachyon
Bradi2g21197 1.0kb downstream 1.0kb downstream 3119 true Bd2: 18581815-18584933 Brachypodium distachyon
Bradi2g21197 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18583934-18584933 Brachypodium distachyon
Bradi2g21197 2.0kb upstream 2.0kb upstream 4119 true Bd2: 18579815-18583933 Brachypodium distachyon
Bradi2g21197 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18579815-18581814 Brachypodium distachyon
Bradi2g21197 2.0kb downstream 2.0kb downstream 4119 true Bd2: 18581815-18585933 Brachypodium distachyon
Bradi2g21197 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18583934-18585933 Brachypodium distachyon
Bradi2g21197 5.0kb upstream 5.0kb upstream 7119 true Bd2: 18576815-18583933 Brachypodium distachyon
Bradi2g21197 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18576815-18581814 Brachypodium distachyon
Bradi2g21197 5.0kb downstream 5.0kb downstream 7119 true Bd2: 18581815-18588933 Brachypodium distachyon
Bradi2g21197 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18583934-18588933 Brachypodium distachyon
Bradi2g21197 10.0kb upstream 10.0kb upstream 12119 true Bd2: 18571815-18583933 Brachypodium distachyon
Bradi2g21197 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18571815-18581814 Brachypodium distachyon
Bradi2g21197 10.0kb downstream 10.0kb downstream 12119 true Bd2: 18581815-18593933 Brachypodium distachyon
Bradi2g21197 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18583934-18593933 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577744 5269 Grass View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.537        
cufflinks 0.556        
cufflinks 0.592        
cufflinks 0.899        
cufflinks 0.169       Low
cufflinks 0.472        
cufflinks 0.341       Low
cufflinks 0.652        
cufflinks 0.715        
cufflinks 0.788        
cufflinks 0.748        
cufflinks 0.938        
cufflinks 0.507        
cufflinks 0.754        
cufflinks 0.759        
cufflinks 0.507        
cufflinks 0.264       Low
cufflinks 1.355       High
cufflinks 0.626        
cufflinks 0.531        
cufflinks 0.357       Low
cufflinks 0.494        
cufflinks 0.546        
cufflinks 0.851        
cufflinks 0.46        
cufflinks 0.811        
cufflinks 0.962        
cufflinks 0.757        
cufflinks 0.705        
cufflinks 0.169       Low

0 Strain