Gene : Bradi2g21290 B. distachyon v3.1
Defline:  (1 of 1) PTHR10252//PTHR10252:SF35 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2718
Name:  ? Bradi2g21290 Secondary Identifier:  ? PAC:32775670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21290 0.5kb upstream 0.5kb upstream 6844 true Bd2: 18665104-18671947 Brachypodium distachyon
Bradi2g21290 0.5kb upstream 0.5kb upstream 500 false Bd2: 18671448-18671947 Brachypodium distachyon
Bradi2g21290 0.5kb downstream 0.5kb downstream 6844 true Bd2: 18664604-18671447 Brachypodium distachyon
Bradi2g21290 0.5kb downstream 0.5kb downstream 500 false Bd2: 18664604-18665103 Brachypodium distachyon
Bradi2g21290 1.0kb upstream 1.0kb upstream 7344 true Bd2: 18665104-18672447 Brachypodium distachyon
Bradi2g21290 1.0kb upstream 1.0kb upstream 1000 false Bd2: 18671448-18672447 Brachypodium distachyon
Bradi2g21290 1.0kb downstream 1.0kb downstream 7344 true Bd2: 18664104-18671447 Brachypodium distachyon
Bradi2g21290 1.0kb downstream 1.0kb downstream 1000 false Bd2: 18664104-18665103 Brachypodium distachyon
Bradi2g21290 2.0kb upstream 2.0kb upstream 8344 true Bd2: 18665104-18673447 Brachypodium distachyon
Bradi2g21290 2.0kb upstream 2.0kb upstream 2000 false Bd2: 18671448-18673447 Brachypodium distachyon
Bradi2g21290 2.0kb downstream 2.0kb downstream 8344 true Bd2: 18663104-18671447 Brachypodium distachyon
Bradi2g21290 2.0kb downstream 2.0kb downstream 2000 false Bd2: 18663104-18665103 Brachypodium distachyon
Bradi2g21290 5.0kb upstream 5.0kb upstream 11344 true Bd2: 18665104-18676447 Brachypodium distachyon
Bradi2g21290 5.0kb upstream 5.0kb upstream 5000 false Bd2: 18671448-18676447 Brachypodium distachyon
Bradi2g21290 5.0kb downstream 5.0kb downstream 11344 true Bd2: 18660104-18671447 Brachypodium distachyon
Bradi2g21290 5.0kb downstream 5.0kb downstream 5000 false Bd2: 18660104-18665103 Brachypodium distachyon
Bradi2g21290 10.0kb upstream 10.0kb upstream 16344 true Bd2: 18665104-18681447 Brachypodium distachyon
Bradi2g21290 10.0kb upstream 10.0kb upstream 10000 false Bd2: 18671448-18681447 Brachypodium distachyon
Bradi2g21290 10.0kb downstream 10.0kb downstream 16344 true Bd2: 18655104-18671447 Brachypodium distachyon
Bradi2g21290 10.0kb downstream 10.0kb downstream 10000 false Bd2: 18655104-18665103 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577072 5269 Grass View MSA
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43        
cufflinks 1.395        
cufflinks 1.726        
cufflinks 1.366        
cufflinks 3.993       High
cufflinks 1.44        
cufflinks 1.426        
cufflinks 1.519        
cufflinks 1.525        
cufflinks 2.823        
cufflinks 3.987       High
cufflinks 1.634        
cufflinks 2.169        
cufflinks 2.581        
cufflinks 1.655        
cufflinks 1.31        
cufflinks 1.935        
cufflinks 1.21       Low
cufflinks 3.121        
cufflinks 8.947       High
cufflinks 1.887        
cufflinks 2.027        
cufflinks 1.541        
cufflinks 1.309        
cufflinks 1.61        
cufflinks 2.239        
cufflinks 2.468        
cufflinks 2.482        
cufflinks 2.212        
cufflinks 1.641        

0 Strain