Gene : Bradi2g21728 B. distachyon v3.1
Defline:  (1 of 1) KOG2896 - UV radiation resistance associated protein Genomic Order:  2749
Name:  ? Bradi2g21728 Secondary Identifier:  ? PAC:32780463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21728 0.5kb upstream 0.5kb upstream 3105 true Bd2: 19112668-19115772 Brachypodium distachyon
Bradi2g21728 0.5kb upstream 0.5kb upstream 500 false Bd2: 19112668-19113167 Brachypodium distachyon
Bradi2g21728 0.5kb downstream 0.5kb downstream 3105 true Bd2: 19113168-19116272 Brachypodium distachyon
Bradi2g21728 0.5kb downstream 0.5kb downstream 500 false Bd2: 19115773-19116272 Brachypodium distachyon
Bradi2g21728 1.0kb upstream 1.0kb upstream 3605 true Bd2: 19112168-19115772 Brachypodium distachyon
Bradi2g21728 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19112168-19113167 Brachypodium distachyon
Bradi2g21728 1.0kb downstream 1.0kb downstream 3605 true Bd2: 19113168-19116772 Brachypodium distachyon
Bradi2g21728 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19115773-19116772 Brachypodium distachyon
Bradi2g21728 2.0kb upstream 2.0kb upstream 4605 true Bd2: 19111168-19115772 Brachypodium distachyon
Bradi2g21728 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19111168-19113167 Brachypodium distachyon
Bradi2g21728 2.0kb downstream 2.0kb downstream 4605 true Bd2: 19113168-19117772 Brachypodium distachyon
Bradi2g21728 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19115773-19117772 Brachypodium distachyon
Bradi2g21728 5.0kb upstream 5.0kb upstream 7605 true Bd2: 19108168-19115772 Brachypodium distachyon
Bradi2g21728 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19108168-19113167 Brachypodium distachyon
Bradi2g21728 5.0kb downstream 5.0kb downstream 7605 true Bd2: 19113168-19120772 Brachypodium distachyon
Bradi2g21728 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19115773-19120772 Brachypodium distachyon
Bradi2g21728 10.0kb upstream 10.0kb upstream 12605 true Bd2: 19103168-19115772 Brachypodium distachyon
Bradi2g21728 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19103168-19113167 Brachypodium distachyon
Bradi2g21728 10.0kb downstream 10.0kb downstream 12605 true Bd2: 19113168-19125772 Brachypodium distachyon
Bradi2g21728 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19115773-19125772 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585937 5269 Grass View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.045        
cufflinks 0.514        
cufflinks 0.644        
cufflinks 1.083        
cufflinks 2.573       High
cufflinks 0.389        
cufflinks 0.44        
cufflinks 1.047        
cufflinks 0.616        
cufflinks 1.785        
cufflinks 0.285       Low
cufflinks 0.523        
cufflinks 0.173       Low
cufflinks 0.234       Low
cufflinks 1.148        
cufflinks 0.394        
cufflinks 0.829        
cufflinks 0.959        
cufflinks 2.899       High
cufflinks 6.088       High
cufflinks 0.764        
cufflinks 1.074        
cufflinks 1.25        
cufflinks 0.622        
cufflinks 0.627        
cufflinks 1.056        
cufflinks 0.079     Low Low
cufflinks 1.052        
cufflinks 1.094        
cufflinks 0.761        

0 Strain