Gene : Bradi2g21770 B. distachyon v3.1
Defline:  (1 of 3) K02908 - large subunit ribosomal protein L30e (RP-L30e, RPL30) Genomic Order:  2753
Name:  ? Bradi2g21770 Secondary Identifier:  ? PAC:32779004
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21770 0.5kb upstream 0.5kb upstream 2921 true Bd2: 19145259-19148179 Brachypodium distachyon
Bradi2g21770 0.5kb upstream 0.5kb upstream 500 false Bd2: 19147680-19148179 Brachypodium distachyon
Bradi2g21770 0.5kb downstream 0.5kb downstream 2921 true Bd2: 19144759-19147679 Brachypodium distachyon
Bradi2g21770 0.5kb downstream 0.5kb downstream 500 false Bd2: 19144759-19145258 Brachypodium distachyon
Bradi2g21770 1.0kb upstream 1.0kb upstream 3421 true Bd2: 19145259-19148679 Brachypodium distachyon
Bradi2g21770 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19147680-19148679 Brachypodium distachyon
Bradi2g21770 1.0kb downstream 1.0kb downstream 3421 true Bd2: 19144259-19147679 Brachypodium distachyon
Bradi2g21770 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19144259-19145258 Brachypodium distachyon
Bradi2g21770 2.0kb upstream 2.0kb upstream 4421 true Bd2: 19145259-19149679 Brachypodium distachyon
Bradi2g21770 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19147680-19149679 Brachypodium distachyon
Bradi2g21770 2.0kb downstream 2.0kb downstream 4421 true Bd2: 19143259-19147679 Brachypodium distachyon
Bradi2g21770 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19143259-19145258 Brachypodium distachyon
Bradi2g21770 5.0kb upstream 5.0kb upstream 7421 true Bd2: 19145259-19152679 Brachypodium distachyon
Bradi2g21770 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19147680-19152679 Brachypodium distachyon
Bradi2g21770 5.0kb downstream 5.0kb downstream 7421 true Bd2: 19140259-19147679 Brachypodium distachyon
Bradi2g21770 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19140259-19145258 Brachypodium distachyon
Bradi2g21770 10.0kb upstream 10.0kb upstream 12421 true Bd2: 19145259-19157679 Brachypodium distachyon
Bradi2g21770 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19147680-19157679 Brachypodium distachyon
Bradi2g21770 10.0kb downstream 10.0kb downstream 12421 true Bd2: 19135259-19147679 Brachypodium distachyon
Bradi2g21770 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19135259-19145258 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586289 5269 Grass View MSA
122051684 5273 Angiosperm View MSA
121344063 5274 Embryophyte View MSA
123425041 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.901     High  
cufflinks 66.435     High  
cufflinks 61.938     High  
cufflinks 63.772     High  
cufflinks 61.419     High  
cufflinks 58.328     High  
cufflinks 66.756     High  
cufflinks 54.65     High  
cufflinks 51.238     High  
cufflinks 67.325     High  
cufflinks 10.813     High Low
cufflinks 38.968     High  
cufflinks 7.441     High Low
cufflinks 9.191     High Low
cufflinks 31.167     High  
cufflinks 72.18     High  
cufflinks 92.761     High  
cufflinks 122.009     High High
cufflinks 92.346     High  
cufflinks 29.918     High  
cufflinks 84.979     High  
cufflinks 46.814     High  
cufflinks 41.872     High  
cufflinks 43.313     High  
cufflinks 54.481     High  
cufflinks 70.056     High  
cufflinks 11.438     High Low
cufflinks 58.066     High  
cufflinks 52.904     High  
cufflinks 74.414     High  

0 Strain