Gene : Bradi2g21790 B. distachyon v3.1
Defline:  (1 of 1) PTHR24349//PTHR24349:SF88 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE CG17528 Genomic Order:  2755
Name:  ? Bradi2g21790 Secondary Identifier:  ? PAC:32772307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g21790 0.5kb upstream 0.5kb upstream 4481 true Bd2: 19150000-19154480 Brachypodium distachyon
Bradi2g21790 0.5kb upstream 0.5kb upstream 500 false Bd2: 19150000-19150499 Brachypodium distachyon
Bradi2g21790 0.5kb downstream 0.5kb downstream 4481 true Bd2: 19150500-19154980 Brachypodium distachyon
Bradi2g21790 0.5kb downstream 0.5kb downstream 500 false Bd2: 19154481-19154980 Brachypodium distachyon
Bradi2g21790 1.0kb upstream 1.0kb upstream 4981 true Bd2: 19149500-19154480 Brachypodium distachyon
Bradi2g21790 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19149500-19150499 Brachypodium distachyon
Bradi2g21790 1.0kb downstream 1.0kb downstream 4981 true Bd2: 19150500-19155480 Brachypodium distachyon
Bradi2g21790 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19154481-19155480 Brachypodium distachyon
Bradi2g21790 2.0kb upstream 2.0kb upstream 5981 true Bd2: 19148500-19154480 Brachypodium distachyon
Bradi2g21790 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19148500-19150499 Brachypodium distachyon
Bradi2g21790 2.0kb downstream 2.0kb downstream 5981 true Bd2: 19150500-19156480 Brachypodium distachyon
Bradi2g21790 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19154481-19156480 Brachypodium distachyon
Bradi2g21790 5.0kb upstream 5.0kb upstream 8981 true Bd2: 19145500-19154480 Brachypodium distachyon
Bradi2g21790 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19145500-19150499 Brachypodium distachyon
Bradi2g21790 5.0kb downstream 5.0kb downstream 8981 true Bd2: 19150500-19159480 Brachypodium distachyon
Bradi2g21790 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19154481-19159480 Brachypodium distachyon
Bradi2g21790 10.0kb upstream 10.0kb upstream 13981 true Bd2: 19140500-19154480 Brachypodium distachyon
Bradi2g21790 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19140500-19150499 Brachypodium distachyon
Bradi2g21790 10.0kb downstream 10.0kb downstream 13981 true Bd2: 19150500-19164480 Brachypodium distachyon
Bradi2g21790 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19154481-19164480 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575613 5269 Grass View MSA
122049128 5273 Angiosperm View MSA
121348510 5274 Embryophyte View MSA
123380889 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117        
cufflinks 0.092     Low  
cufflinks 0.078     Low  
cufflinks 0.143        
cufflinks 0.182        
cufflinks 0.164        
cufflinks 0.179        
cufflinks 0.15        
cufflinks 0.209        
cufflinks 0.132        
cufflinks 0.304        
cufflinks 0.17        
cufflinks 0.213        
cufflinks 0.255        
cufflinks 0.115        
cufflinks 0.11        
cufflinks 0.13     Low  
cufflinks 8.534       High
cufflinks 0.234        
cufflinks 0.229        
cufflinks 0.091     Low  
cufflinks 0.101     Low  
cufflinks 0.153        
cufflinks 0.15        
cufflinks 0.153        
cufflinks 0.073     Low Low
cufflinks 0.193        
cufflinks 0.138        
cufflinks 0.07     Low Low
cufflinks 0.087     Low  

0 Strain