Gene : Bradi4g29271 B. distachyon v3.1
Defline:  (1 of 1) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  3760
Name:  ? Bradi4g29271 Secondary Identifier:  ? PAC:32787146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g29271 0.5kb upstream 0.5kb upstream 3814 true Bd4: 34603588-34607401 Brachypodium distachyon
Bradi4g29271 0.5kb upstream 0.5kb upstream 500 false Bd4: 34603588-34604087 Brachypodium distachyon
Bradi4g29271 0.5kb downstream 0.5kb downstream 3814 true Bd4: 34604088-34607901 Brachypodium distachyon
Bradi4g29271 0.5kb downstream 0.5kb downstream 500 false Bd4: 34607402-34607901 Brachypodium distachyon
Bradi4g29271 1.0kb upstream 1.0kb upstream 4314 true Bd4: 34603088-34607401 Brachypodium distachyon
Bradi4g29271 1.0kb upstream 1.0kb upstream 1000 false Bd4: 34603088-34604087 Brachypodium distachyon
Bradi4g29271 1.0kb downstream 1.0kb downstream 4314 true Bd4: 34604088-34608401 Brachypodium distachyon
Bradi4g29271 1.0kb downstream 1.0kb downstream 1000 false Bd4: 34607402-34608401 Brachypodium distachyon
Bradi4g29271 2.0kb upstream 2.0kb upstream 5314 true Bd4: 34602088-34607401 Brachypodium distachyon
Bradi4g29271 2.0kb upstream 2.0kb upstream 2000 false Bd4: 34602088-34604087 Brachypodium distachyon
Bradi4g29271 2.0kb downstream 2.0kb downstream 5314 true Bd4: 34604088-34609401 Brachypodium distachyon
Bradi4g29271 2.0kb downstream 2.0kb downstream 2000 false Bd4: 34607402-34609401 Brachypodium distachyon
Bradi4g29271 5.0kb upstream 5.0kb upstream 8314 true Bd4: 34599088-34607401 Brachypodium distachyon
Bradi4g29271 5.0kb upstream 5.0kb upstream 5000 false Bd4: 34599088-34604087 Brachypodium distachyon
Bradi4g29271 5.0kb downstream 5.0kb downstream 8314 true Bd4: 34604088-34612401 Brachypodium distachyon
Bradi4g29271 5.0kb downstream 5.0kb downstream 5000 false Bd4: 34607402-34612401 Brachypodium distachyon
Bradi4g29271 10.0kb upstream 10.0kb upstream 13314 true Bd4: 34594088-34607401 Brachypodium distachyon
Bradi4g29271 10.0kb upstream 10.0kb upstream 10000 false Bd4: 34594088-34604087 Brachypodium distachyon
Bradi4g29271 10.0kb downstream 10.0kb downstream 13314 true Bd4: 34604088-34617401 Brachypodium distachyon
Bradi4g29271 10.0kb downstream 10.0kb downstream 10000 false Bd4: 34607402-34617401 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575336 5269 Grass View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.065     Low  
cufflinks 0.165        
cufflinks 0.203        
cufflinks 0.292       High
cufflinks 0.036     Low  
cufflinks 0.11        
cufflinks 0.111        
cufflinks 0.124        
cufflinks 0.124        
cufflinks 0.332       High
cufflinks 0.008     Low Low
cufflinks 0.105        
cufflinks 0.231        
cufflinks 0.05     Low  
cufflinks 0.15        
cufflinks 0.153        
cufflinks 0.215        
cufflinks 0.131     Low  
cufflinks 0.147     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.168        
cufflinks 0.156        
cufflinks 0.114        
cufflinks 0.087     Low  
cufflinks 0.322       High
cufflinks 0.007     Low Low
cufflinks 0.269        
cufflinks 0.216        
cufflinks 0.009     Low Low

0 Strain