Gene : Bradi2g22180 B. distachyon v3.1
Defline:  (1 of 7) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  2800
Name:  ? Bradi2g22180 Secondary Identifier:  ? PAC:32772255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22180 0.5kb upstream 0.5kb upstream 6563 true Bd2: 19654004-19660566 Brachypodium distachyon
Bradi2g22180 0.5kb upstream 0.5kb upstream 500 false Bd2: 19654004-19654503 Brachypodium distachyon
Bradi2g22180 0.5kb downstream 0.5kb downstream 6563 true Bd2: 19654504-19661066 Brachypodium distachyon
Bradi2g22180 0.5kb downstream 0.5kb downstream 500 false Bd2: 19660567-19661066 Brachypodium distachyon
Bradi2g22180 1.0kb upstream 1.0kb upstream 7063 true Bd2: 19653504-19660566 Brachypodium distachyon
Bradi2g22180 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19653504-19654503 Brachypodium distachyon
Bradi2g22180 1.0kb downstream 1.0kb downstream 7063 true Bd2: 19654504-19661566 Brachypodium distachyon
Bradi2g22180 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19660567-19661566 Brachypodium distachyon
Bradi2g22180 2.0kb upstream 2.0kb upstream 8063 true Bd2: 19652504-19660566 Brachypodium distachyon
Bradi2g22180 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19652504-19654503 Brachypodium distachyon
Bradi2g22180 2.0kb downstream 2.0kb downstream 8063 true Bd2: 19654504-19662566 Brachypodium distachyon
Bradi2g22180 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19660567-19662566 Brachypodium distachyon
Bradi2g22180 5.0kb upstream 5.0kb upstream 11063 true Bd2: 19649504-19660566 Brachypodium distachyon
Bradi2g22180 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19649504-19654503 Brachypodium distachyon
Bradi2g22180 5.0kb downstream 5.0kb downstream 11063 true Bd2: 19654504-19665566 Brachypodium distachyon
Bradi2g22180 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19660567-19665566 Brachypodium distachyon
Bradi2g22180 10.0kb upstream 10.0kb upstream 16063 true Bd2: 19644504-19660566 Brachypodium distachyon
Bradi2g22180 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19644504-19654503 Brachypodium distachyon
Bradi2g22180 10.0kb downstream 10.0kb downstream 16063 true Bd2: 19654504-19670566 Brachypodium distachyon
Bradi2g22180 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19660567-19670566 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578906 5269 Grass View MSA
122049764 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351227 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.894        
cufflinks 8.426        
cufflinks 7.94        
cufflinks 8.371        
cufflinks 1.723       Low
cufflinks 7.312        
cufflinks 6.594        
cufflinks 7.386        
cufflinks 6.294        
cufflinks 5.715        
cufflinks 1.775       Low
cufflinks 8.383        
cufflinks 2.497        
cufflinks 2.028        
cufflinks 5.481        
cufflinks 8.611        
cufflinks 4.598        
cufflinks 17.26     High High
cufflinks 2.704        
cufflinks 0.197       Low
cufflinks 6.431        
cufflinks 8.238        
cufflinks 6.776        
cufflinks 6.33        
cufflinks 5.971        
cufflinks 6.986        
cufflinks 1.981       Low
cufflinks 6.337        
cufflinks 7.031        
cufflinks 15.239     High High

0 Strain