Gene : Bradi2g22430 B. distachyon v3.1
Defline:  (1 of 1) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  2835
Name:  ? Bradi2g22430 Secondary Identifier:  ? PAC:32781473
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22430 0.5kb upstream 0.5kb upstream 4227 true Bd2: 19947351-19951577 Brachypodium distachyon
Bradi2g22430 0.5kb upstream 0.5kb upstream 500 false Bd2: 19947351-19947850 Brachypodium distachyon
Bradi2g22430 0.5kb downstream 0.5kb downstream 4227 true Bd2: 19947851-19952077 Brachypodium distachyon
Bradi2g22430 0.5kb downstream 0.5kb downstream 500 false Bd2: 19951578-19952077 Brachypodium distachyon
Bradi2g22430 1.0kb upstream 1.0kb upstream 4727 true Bd2: 19946851-19951577 Brachypodium distachyon
Bradi2g22430 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19946851-19947850 Brachypodium distachyon
Bradi2g22430 1.0kb downstream 1.0kb downstream 4727 true Bd2: 19947851-19952577 Brachypodium distachyon
Bradi2g22430 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19951578-19952577 Brachypodium distachyon
Bradi2g22430 2.0kb upstream 2.0kb upstream 5727 true Bd2: 19945851-19951577 Brachypodium distachyon
Bradi2g22430 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19945851-19947850 Brachypodium distachyon
Bradi2g22430 2.0kb downstream 2.0kb downstream 5727 true Bd2: 19947851-19953577 Brachypodium distachyon
Bradi2g22430 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19951578-19953577 Brachypodium distachyon
Bradi2g22430 5.0kb upstream 5.0kb upstream 8727 true Bd2: 19942851-19951577 Brachypodium distachyon
Bradi2g22430 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19942851-19947850 Brachypodium distachyon
Bradi2g22430 5.0kb downstream 5.0kb downstream 8727 true Bd2: 19947851-19956577 Brachypodium distachyon
Bradi2g22430 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19951578-19956577 Brachypodium distachyon
Bradi2g22430 10.0kb upstream 10.0kb upstream 13727 true Bd2: 19937851-19951577 Brachypodium distachyon
Bradi2g22430 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19937851-19947850 Brachypodium distachyon
Bradi2g22430 10.0kb downstream 10.0kb downstream 13727 true Bd2: 19947851-19961577 Brachypodium distachyon
Bradi2g22430 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19951578-19961577 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582794 5269 Grass View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.889     High  
cufflinks 9.623        
cufflinks 11.008     High  
cufflinks 9.192        
cufflinks 4.552       Low
cufflinks 9.382     High  
cufflinks 8.702        
cufflinks 11.12     High  
cufflinks 9.429        
cufflinks 8.305        
cufflinks 8.847     High  
cufflinks 13.239     High High
cufflinks 8.527     High  
cufflinks 7.761     High  
cufflinks 15.008     High High
cufflinks 9.368        
cufflinks 7.027        
cufflinks 13.28     High High
cufflinks 11.375        
cufflinks 2.538       Low
cufflinks 10.093        
cufflinks 13.148     High High
cufflinks 10.557     High  
cufflinks 10.137     High  
cufflinks 7.982        
cufflinks 10.227        
cufflinks 11.306     High  
cufflinks 9.879        
cufflinks 10.908     High  
cufflinks 16.308     High High

0 Strain