Gene : Bradi4g35920 B. distachyon v3.1
Defline:  (1 of 2) PF17067 - Ribosomal protein S31e (RPS31) Genomic Order:  4616
Name:  ? Bradi4g35920 Secondary Identifier:  ? PAC:32785787
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g35920 0.5kb upstream 0.5kb upstream 1313 true Bd4: 41128591-41129903 Brachypodium distachyon
Bradi4g35920 0.5kb upstream 0.5kb upstream 500 false Bd4: 41129404-41129903 Brachypodium distachyon
Bradi4g35920 0.5kb downstream 0.5kb downstream 1313 true Bd4: 41128091-41129403 Brachypodium distachyon
Bradi4g35920 0.5kb downstream 0.5kb downstream 500 false Bd4: 41128091-41128590 Brachypodium distachyon
Bradi4g35920 1.0kb upstream 1.0kb upstream 1813 true Bd4: 41128591-41130403 Brachypodium distachyon
Bradi4g35920 1.0kb upstream 1.0kb upstream 1000 false Bd4: 41129404-41130403 Brachypodium distachyon
Bradi4g35920 1.0kb downstream 1.0kb downstream 1813 true Bd4: 41127591-41129403 Brachypodium distachyon
Bradi4g35920 1.0kb downstream 1.0kb downstream 1000 false Bd4: 41127591-41128590 Brachypodium distachyon
Bradi4g35920 2.0kb upstream 2.0kb upstream 2813 true Bd4: 41128591-41131403 Brachypodium distachyon
Bradi4g35920 2.0kb upstream 2.0kb upstream 2000 false Bd4: 41129404-41131403 Brachypodium distachyon
Bradi4g35920 2.0kb downstream 2.0kb downstream 2813 true Bd4: 41126591-41129403 Brachypodium distachyon
Bradi4g35920 2.0kb downstream 2.0kb downstream 2000 false Bd4: 41126591-41128590 Brachypodium distachyon
Bradi4g35920 5.0kb upstream 5.0kb upstream 5813 true Bd4: 41128591-41134403 Brachypodium distachyon
Bradi4g35920 5.0kb upstream 5.0kb upstream 5000 false Bd4: 41129404-41134403 Brachypodium distachyon
Bradi4g35920 5.0kb downstream 5.0kb downstream 5813 true Bd4: 41123591-41129403 Brachypodium distachyon
Bradi4g35920 5.0kb downstream 5.0kb downstream 5000 false Bd4: 41123591-41128590 Brachypodium distachyon
Bradi4g35920 10.0kb upstream 10.0kb upstream 10813 true Bd4: 41128591-41139403 Brachypodium distachyon
Bradi4g35920 10.0kb upstream 10.0kb upstream 10000 false Bd4: 41129404-41139403 Brachypodium distachyon
Bradi4g35920 10.0kb downstream 10.0kb downstream 10813 true Bd4: 41118591-41129403 Brachypodium distachyon
Bradi4g35920 10.0kb downstream 10.0kb downstream 10000 false Bd4: 41118591-41128590 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569985 5269 Grass View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.837     High  
cufflinks 11.38     High  
cufflinks 11.715     High  
cufflinks 13.0     High  
cufflinks 10.767     High  
cufflinks 9.865     High  
cufflinks 14.221     High  
cufflinks 10.796     High  
cufflinks 10.427     High  
cufflinks 16.837     High  
cufflinks 9.15     High  
cufflinks 6.406       Low
cufflinks 6.607       Low
cufflinks 8.046     High Low
cufflinks 6.57       Low
cufflinks 10.573     High  
cufflinks 27.129     High High
cufflinks 22.618     High High
cufflinks 31.092     High High
cufflinks 10.88        
cufflinks 22.427     High High
cufflinks 11.0     High  
cufflinks 11.413     High  
cufflinks 10.037     High  
cufflinks 13.552     High  
cufflinks 11.956     High  
cufflinks 9.796     High  
cufflinks 15.394     High  
cufflinks 13.691     High  
cufflinks 13.648     High  

0 Strain