Gene : Bradi2g22660 B. distachyon v3.1
Defline:  (1 of 1) PTHR30289 - UNCHARACTERIZED PROTEIN YBCL-RELATED Genomic Order:  2867
Name:  ? Bradi2g22660 Secondary Identifier:  ? PAC:32782065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22660 0.5kb upstream 0.5kb upstream 1391 true Bd2: 20161355-20162745 Brachypodium distachyon
Bradi2g22660 0.5kb upstream 0.5kb upstream 500 false Bd2: 20161355-20161854 Brachypodium distachyon
Bradi2g22660 0.5kb downstream 0.5kb downstream 1391 true Bd2: 20161855-20163245 Brachypodium distachyon
Bradi2g22660 0.5kb downstream 0.5kb downstream 500 false Bd2: 20162746-20163245 Brachypodium distachyon
Bradi2g22660 1.0kb upstream 1.0kb upstream 1891 true Bd2: 20160855-20162745 Brachypodium distachyon
Bradi2g22660 1.0kb upstream 1.0kb upstream 1000 false Bd2: 20160855-20161854 Brachypodium distachyon
Bradi2g22660 1.0kb downstream 1.0kb downstream 1891 true Bd2: 20161855-20163745 Brachypodium distachyon
Bradi2g22660 1.0kb downstream 1.0kb downstream 1000 false Bd2: 20162746-20163745 Brachypodium distachyon
Bradi2g22660 2.0kb upstream 2.0kb upstream 2891 true Bd2: 20159855-20162745 Brachypodium distachyon
Bradi2g22660 2.0kb upstream 2.0kb upstream 2000 false Bd2: 20159855-20161854 Brachypodium distachyon
Bradi2g22660 2.0kb downstream 2.0kb downstream 2891 true Bd2: 20161855-20164745 Brachypodium distachyon
Bradi2g22660 2.0kb downstream 2.0kb downstream 2000 false Bd2: 20162746-20164745 Brachypodium distachyon
Bradi2g22660 5.0kb upstream 5.0kb upstream 5891 true Bd2: 20156855-20162745 Brachypodium distachyon
Bradi2g22660 5.0kb upstream 5.0kb upstream 5000 false Bd2: 20156855-20161854 Brachypodium distachyon
Bradi2g22660 5.0kb downstream 5.0kb downstream 5891 true Bd2: 20161855-20167745 Brachypodium distachyon
Bradi2g22660 5.0kb downstream 5.0kb downstream 5000 false Bd2: 20162746-20167745 Brachypodium distachyon
Bradi2g22660 10.0kb upstream 10.0kb upstream 10891 true Bd2: 20151855-20162745 Brachypodium distachyon
Bradi2g22660 10.0kb upstream 10.0kb upstream 10000 false Bd2: 20151855-20161854 Brachypodium distachyon
Bradi2g22660 10.0kb downstream 10.0kb downstream 10891 true Bd2: 20161855-20172745 Brachypodium distachyon
Bradi2g22660 10.0kb downstream 10.0kb downstream 10000 false Bd2: 20162746-20172745 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580267 5269 Grass View MSA
122050615 5273 Angiosperm View MSA
121346096 5274 Embryophyte View MSA
123380328 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.685        
cufflinks 0.078     Low  
cufflinks 0.097        
cufflinks 0.055     Low  
cufflinks 93.861     High High
cufflinks 0.02     Low Low
cufflinks 0.148        
cufflinks 0.05     Low  
cufflinks 0.084     Low  
cufflinks 0.234        
cufflinks 0.489        
cufflinks 0.055     Low  
cufflinks 0.141        
cufflinks 0.095        
cufflinks 0.628        
cufflinks 0.163        
cufflinks 0.683        
cufflinks 3.341        
cufflinks 107.634     High High
cufflinks 2274.072     High High
cufflinks 1.814        
cufflinks 0.27        
cufflinks 0.551        
cufflinks 0.051     Low  
cufflinks 0.115        
cufflinks 0.149        
cufflinks 0.055     Low  
cufflinks 0.139        
cufflinks 0.111     Low  
cufflinks 0.613        

0 Strain