Gene : Bradi2g22490 B. distachyon v3.1
Defline:  (1 of 2) PTHR12542//PTHR12542:SF30 - EXOCYST COMPLEX PROTEIN EXO70 Genomic Order:  2843
Name:  ? Bradi2g22490 Secondary Identifier:  ? PAC:32779642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g22490 0.5kb upstream 0.5kb upstream 4314 true Bd2: 19988667-19992980 Brachypodium distachyon
Bradi2g22490 0.5kb upstream 0.5kb upstream 500 false Bd2: 19988667-19989166 Brachypodium distachyon
Bradi2g22490 0.5kb downstream 0.5kb downstream 4314 true Bd2: 19989167-19993480 Brachypodium distachyon
Bradi2g22490 0.5kb downstream 0.5kb downstream 500 false Bd2: 19992981-19993480 Brachypodium distachyon
Bradi2g22490 1.0kb upstream 1.0kb upstream 4814 true Bd2: 19988167-19992980 Brachypodium distachyon
Bradi2g22490 1.0kb upstream 1.0kb upstream 1000 false Bd2: 19988167-19989166 Brachypodium distachyon
Bradi2g22490 1.0kb downstream 1.0kb downstream 4814 true Bd2: 19989167-19993980 Brachypodium distachyon
Bradi2g22490 1.0kb downstream 1.0kb downstream 1000 false Bd2: 19992981-19993980 Brachypodium distachyon
Bradi2g22490 2.0kb upstream 2.0kb upstream 5814 true Bd2: 19987167-19992980 Brachypodium distachyon
Bradi2g22490 2.0kb upstream 2.0kb upstream 2000 false Bd2: 19987167-19989166 Brachypodium distachyon
Bradi2g22490 2.0kb downstream 2.0kb downstream 5814 true Bd2: 19989167-19994980 Brachypodium distachyon
Bradi2g22490 2.0kb downstream 2.0kb downstream 2000 false Bd2: 19992981-19994980 Brachypodium distachyon
Bradi2g22490 5.0kb upstream 5.0kb upstream 8814 true Bd2: 19984167-19992980 Brachypodium distachyon
Bradi2g22490 5.0kb upstream 5.0kb upstream 5000 false Bd2: 19984167-19989166 Brachypodium distachyon
Bradi2g22490 5.0kb downstream 5.0kb downstream 8814 true Bd2: 19989167-19997980 Brachypodium distachyon
Bradi2g22490 5.0kb downstream 5.0kb downstream 5000 false Bd2: 19992981-19997980 Brachypodium distachyon
Bradi2g22490 10.0kb upstream 10.0kb upstream 13814 true Bd2: 19979167-19992980 Brachypodium distachyon
Bradi2g22490 10.0kb upstream 10.0kb upstream 10000 false Bd2: 19979167-19989166 Brachypodium distachyon
Bradi2g22490 10.0kb downstream 10.0kb downstream 13814 true Bd2: 19989167-20002980 Brachypodium distachyon
Bradi2g22490 10.0kb downstream 10.0kb downstream 10000 false Bd2: 19992981-20002980 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580817 5269 Grass View MSA
122047493 5273 Angiosperm View MSA
123429009 5275 Viridiplantae View MSA
121351326 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.168     High High
cufflinks 9.292        
cufflinks 10.303        
cufflinks 9.315        
cufflinks 9.111     High  
cufflinks 7.553        
cufflinks 8.109        
cufflinks 10.314     High  
cufflinks 8.09        
cufflinks 8.115        
cufflinks 12.238     High  
cufflinks 13.392     High High
cufflinks 6.273       Low
cufflinks 7.66        
cufflinks 15.034     High High
cufflinks 8.995        
cufflinks 7.884        
cufflinks 11.21        
cufflinks 18.169     High High
cufflinks 6.839        
cufflinks 10.453        
cufflinks 8.961        
cufflinks 8.661        
cufflinks 7.857        
cufflinks 7.114        
cufflinks 9.073        
cufflinks 7.245        
cufflinks 10.142        
cufflinks 9.479        
cufflinks 14.303     High High

0 Strain