Gene : Bradi4g36910 B. distachyon v3.1
Defline:  (1 of 1) PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Genomic Order:  4743
Name:  ? Bradi4g36910 Secondary Identifier:  ? PAC:32783693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g36910 0.5kb upstream 0.5kb upstream 4412 true Bd4: 42003326-42007737 Brachypodium distachyon
Bradi4g36910 0.5kb upstream 0.5kb upstream 500 false Bd4: 42007238-42007737 Brachypodium distachyon
Bradi4g36910 0.5kb downstream 0.5kb downstream 4412 true Bd4: 42002826-42007237 Brachypodium distachyon
Bradi4g36910 0.5kb downstream 0.5kb downstream 500 false Bd4: 42002826-42003325 Brachypodium distachyon
Bradi4g36910 1.0kb upstream 1.0kb upstream 4912 true Bd4: 42003326-42008237 Brachypodium distachyon
Bradi4g36910 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42007238-42008237 Brachypodium distachyon
Bradi4g36910 1.0kb downstream 1.0kb downstream 4912 true Bd4: 42002326-42007237 Brachypodium distachyon
Bradi4g36910 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42002326-42003325 Brachypodium distachyon
Bradi4g36910 2.0kb upstream 2.0kb upstream 5912 true Bd4: 42003326-42009237 Brachypodium distachyon
Bradi4g36910 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42007238-42009237 Brachypodium distachyon
Bradi4g36910 2.0kb downstream 2.0kb downstream 5912 true Bd4: 42001326-42007237 Brachypodium distachyon
Bradi4g36910 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42001326-42003325 Brachypodium distachyon
Bradi4g36910 5.0kb upstream 5.0kb upstream 8912 true Bd4: 42003326-42012237 Brachypodium distachyon
Bradi4g36910 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42007238-42012237 Brachypodium distachyon
Bradi4g36910 5.0kb downstream 5.0kb downstream 8912 true Bd4: 41998326-42007237 Brachypodium distachyon
Bradi4g36910 5.0kb downstream 5.0kb downstream 5000 false Bd4: 41998326-42003325 Brachypodium distachyon
Bradi4g36910 10.0kb upstream 10.0kb upstream 13912 true Bd4: 42003326-42017237 Brachypodium distachyon
Bradi4g36910 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42007238-42017237 Brachypodium distachyon
Bradi4g36910 10.0kb downstream 10.0kb downstream 13912 true Bd4: 41993326-42007237 Brachypodium distachyon
Bradi4g36910 10.0kb downstream 10.0kb downstream 10000 false Bd4: 41993326-42003325 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573017 5269 Grass View MSA
122042177 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65        
cufflinks 4.319        
cufflinks 3.656        
cufflinks 3.034        
cufflinks 1.451        
cufflinks 3.464        
cufflinks 4.125        
cufflinks 3.382        
cufflinks 3.421        
cufflinks 2.58        
cufflinks 0.632       Low
cufflinks 3.396        
cufflinks 0.474       Low
cufflinks 0.479       Low
cufflinks 0.893        
cufflinks 3.699        
cufflinks 2.69        
cufflinks 6.911       High
cufflinks 3.064        
cufflinks 0.409       Low
cufflinks 4.539        
cufflinks 3.809        
cufflinks 3.147        
cufflinks 2.775        
cufflinks 2.933        
cufflinks 3.224        
cufflinks 0.221       Low
cufflinks 2.777        
cufflinks 3.135        
cufflinks 6.165       High

0 Strain