Gene : Bradi4g36820 B. distachyon v3.1
Defline:  (1 of 99) PF02458 - Transferase family (Transferase) Genomic Order:  4729
Name:  ? Bradi4g36820 Secondary Identifier:  ? PAC:32790146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g36820 0.5kb upstream 0.5kb upstream 2221 true Bd4: 41904408-41906628 Brachypodium distachyon
Bradi4g36820 0.5kb upstream 0.5kb upstream 500 false Bd4: 41904408-41904907 Brachypodium distachyon
Bradi4g36820 0.5kb downstream 0.5kb downstream 2221 true Bd4: 41904908-41907128 Brachypodium distachyon
Bradi4g36820 0.5kb downstream 0.5kb downstream 500 false Bd4: 41906629-41907128 Brachypodium distachyon
Bradi4g36820 1.0kb upstream 1.0kb upstream 2721 true Bd4: 41903908-41906628 Brachypodium distachyon
Bradi4g36820 1.0kb upstream 1.0kb upstream 1000 false Bd4: 41903908-41904907 Brachypodium distachyon
Bradi4g36820 1.0kb downstream 1.0kb downstream 2721 true Bd4: 41904908-41907628 Brachypodium distachyon
Bradi4g36820 1.0kb downstream 1.0kb downstream 1000 false Bd4: 41906629-41907628 Brachypodium distachyon
Bradi4g36820 2.0kb upstream 2.0kb upstream 3721 true Bd4: 41902908-41906628 Brachypodium distachyon
Bradi4g36820 2.0kb upstream 2.0kb upstream 2000 false Bd4: 41902908-41904907 Brachypodium distachyon
Bradi4g36820 2.0kb downstream 2.0kb downstream 3721 true Bd4: 41904908-41908628 Brachypodium distachyon
Bradi4g36820 2.0kb downstream 2.0kb downstream 2000 false Bd4: 41906629-41908628 Brachypodium distachyon
Bradi4g36820 5.0kb upstream 5.0kb upstream 6721 true Bd4: 41899908-41906628 Brachypodium distachyon
Bradi4g36820 5.0kb upstream 5.0kb upstream 5000 false Bd4: 41899908-41904907 Brachypodium distachyon
Bradi4g36820 5.0kb downstream 5.0kb downstream 6721 true Bd4: 41904908-41911628 Brachypodium distachyon
Bradi4g36820 5.0kb downstream 5.0kb downstream 5000 false Bd4: 41906629-41911628 Brachypodium distachyon
Bradi4g36820 10.0kb upstream 10.0kb upstream 11721 true Bd4: 41894908-41906628 Brachypodium distachyon
Bradi4g36820 10.0kb upstream 10.0kb upstream 10000 false Bd4: 41894908-41904907 Brachypodium distachyon
Bradi4g36820 10.0kb downstream 10.0kb downstream 11721 true Bd4: 41904908-41916628 Brachypodium distachyon
Bradi4g36820 10.0kb downstream 10.0kb downstream 10000 false Bd4: 41906629-41916628 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574053 5269 Grass View MSA
122051149 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185        
cufflinks 0.05     Low  
cufflinks 0.038     Low  
cufflinks 0.024     Low Low
cufflinks 0.28        
cufflinks 0.077     Low  
cufflinks 0.094        
cufflinks 0.072     Low  
cufflinks 0.103     Low  
cufflinks 0.068     Low  
cufflinks 0.01     Low Low
cufflinks 0.208        
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.125        
cufflinks 0.107        
cufflinks 0.315        
cufflinks 4.729       High
cufflinks 0.038     Low  
cufflinks 1.137       High
cufflinks 0.19        
cufflinks 0.09     Low  
cufflinks 0.132        
cufflinks 0.079     Low  
cufflinks 0.073     Low  
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122        
cufflinks 0.053     Low  
cufflinks 0.134        

0 Strain