Gene : Bradi2g23390 B. distachyon v3.1
Defline:  (1 of 2) PTHR22883:SF92 - PROTEIN S-ACYLTRANSFERASE 16-RELATED Genomic Order:  2966
Name:  ? Bradi2g23390 Secondary Identifier:  ? PAC:32781182
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23390 0.5kb upstream 0.5kb upstream 3947 true Bd2: 20957442-20961388 Brachypodium distachyon
Bradi2g23390 0.5kb upstream 0.5kb upstream 500 false Bd2: 20960889-20961388 Brachypodium distachyon
Bradi2g23390 0.5kb downstream 0.5kb downstream 3947 true Bd2: 20956942-20960888 Brachypodium distachyon
Bradi2g23390 0.5kb downstream 0.5kb downstream 500 false Bd2: 20956942-20957441 Brachypodium distachyon
Bradi2g23390 1.0kb upstream 1.0kb upstream 4447 true Bd2: 20957442-20961888 Brachypodium distachyon
Bradi2g23390 1.0kb upstream 1.0kb upstream 1000 false Bd2: 20960889-20961888 Brachypodium distachyon
Bradi2g23390 1.0kb downstream 1.0kb downstream 4447 true Bd2: 20956442-20960888 Brachypodium distachyon
Bradi2g23390 1.0kb downstream 1.0kb downstream 1000 false Bd2: 20956442-20957441 Brachypodium distachyon
Bradi2g23390 2.0kb upstream 2.0kb upstream 5447 true Bd2: 20957442-20962888 Brachypodium distachyon
Bradi2g23390 2.0kb upstream 2.0kb upstream 2000 false Bd2: 20960889-20962888 Brachypodium distachyon
Bradi2g23390 2.0kb downstream 2.0kb downstream 5447 true Bd2: 20955442-20960888 Brachypodium distachyon
Bradi2g23390 2.0kb downstream 2.0kb downstream 2000 false Bd2: 20955442-20957441 Brachypodium distachyon
Bradi2g23390 5.0kb upstream 5.0kb upstream 8447 true Bd2: 20957442-20965888 Brachypodium distachyon
Bradi2g23390 5.0kb upstream 5.0kb upstream 5000 false Bd2: 20960889-20965888 Brachypodium distachyon
Bradi2g23390 5.0kb downstream 5.0kb downstream 8447 true Bd2: 20952442-20960888 Brachypodium distachyon
Bradi2g23390 5.0kb downstream 5.0kb downstream 5000 false Bd2: 20952442-20957441 Brachypodium distachyon
Bradi2g23390 10.0kb upstream 10.0kb upstream 13447 true Bd2: 20957442-20970888 Brachypodium distachyon
Bradi2g23390 10.0kb upstream 10.0kb upstream 10000 false Bd2: 20960889-20970888 Brachypodium distachyon
Bradi2g23390 10.0kb downstream 10.0kb downstream 13447 true Bd2: 20947442-20960888 Brachypodium distachyon
Bradi2g23390 10.0kb downstream 10.0kb downstream 10000 false Bd2: 20947442-20957441 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583112 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.547        
cufflinks 4.694        
cufflinks 4.048        
cufflinks 4.602        
cufflinks 3.298        
cufflinks 3.574        
cufflinks 3.942        
cufflinks 2.757        
cufflinks 2.768        
cufflinks 4.285        
cufflinks 1.626       Low
cufflinks 2.812        
cufflinks 2.466       Low
cufflinks 1.831       Low
cufflinks 3.393        
cufflinks 3.488        
cufflinks 4.681        
cufflinks 5.565       High
cufflinks 5.052        
cufflinks 4.35        
cufflinks 5.77       High
cufflinks 3.537        
cufflinks 2.822        
cufflinks 3.341        
cufflinks 4.479        
cufflinks 5.11        
cufflinks 2.598       Low
cufflinks 4.356        
cufflinks 4.038        
cufflinks 4.766        

0 Strain