Gene : Bradi2g23480 B. distachyon v3.1
Defline:  (1 of 1) PTHR12822:SF5 - INTEGRAL MEMBRANE YIP1 FAMILY PROTEIN Genomic Order:  2978
Name:  ? Bradi2g23480 Secondary Identifier:  ? PAC:32770850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g23480 0.5kb upstream 0.5kb upstream 4437 true Bd2: 21020547-21024983 Brachypodium distachyon
Bradi2g23480 0.5kb upstream 0.5kb upstream 500 false Bd2: 21024484-21024983 Brachypodium distachyon
Bradi2g23480 0.5kb downstream 0.5kb downstream 4437 true Bd2: 21020047-21024483 Brachypodium distachyon
Bradi2g23480 0.5kb downstream 0.5kb downstream 500 false Bd2: 21020047-21020546 Brachypodium distachyon
Bradi2g23480 1.0kb upstream 1.0kb upstream 4937 true Bd2: 21020547-21025483 Brachypodium distachyon
Bradi2g23480 1.0kb upstream 1.0kb upstream 1000 false Bd2: 21024484-21025483 Brachypodium distachyon
Bradi2g23480 1.0kb downstream 1.0kb downstream 4937 true Bd2: 21019547-21024483 Brachypodium distachyon
Bradi2g23480 1.0kb downstream 1.0kb downstream 1000 false Bd2: 21019547-21020546 Brachypodium distachyon
Bradi2g23480 2.0kb upstream 2.0kb upstream 5937 true Bd2: 21020547-21026483 Brachypodium distachyon
Bradi2g23480 2.0kb upstream 2.0kb upstream 2000 false Bd2: 21024484-21026483 Brachypodium distachyon
Bradi2g23480 2.0kb downstream 2.0kb downstream 5937 true Bd2: 21018547-21024483 Brachypodium distachyon
Bradi2g23480 2.0kb downstream 2.0kb downstream 2000 false Bd2: 21018547-21020546 Brachypodium distachyon
Bradi2g23480 5.0kb upstream 5.0kb upstream 8937 true Bd2: 21020547-21029483 Brachypodium distachyon
Bradi2g23480 5.0kb upstream 5.0kb upstream 5000 false Bd2: 21024484-21029483 Brachypodium distachyon
Bradi2g23480 5.0kb downstream 5.0kb downstream 8937 true Bd2: 21015547-21024483 Brachypodium distachyon
Bradi2g23480 5.0kb downstream 5.0kb downstream 5000 false Bd2: 21015547-21020546 Brachypodium distachyon
Bradi2g23480 10.0kb upstream 10.0kb upstream 13937 true Bd2: 21020547-21034483 Brachypodium distachyon
Bradi2g23480 10.0kb upstream 10.0kb upstream 10000 false Bd2: 21024484-21034483 Brachypodium distachyon
Bradi2g23480 10.0kb downstream 10.0kb downstream 13937 true Bd2: 21010547-21024483 Brachypodium distachyon
Bradi2g23480 10.0kb downstream 10.0kb downstream 10000 false Bd2: 21010547-21020546 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577175 5269 Grass View MSA
122048759 5273 Angiosperm View MSA
121311097 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.874        
cufflinks 2.042        
cufflinks 1.835        
cufflinks 2.094        
cufflinks 1.531        
cufflinks 1.866        
cufflinks 1.928        
cufflinks 1.811        
cufflinks 1.786        
cufflinks 2.154        
cufflinks 0.983       Low
cufflinks 1.753        
cufflinks 1.225       Low
cufflinks 0.898       Low
cufflinks 1.533        
cufflinks 1.968        
cufflinks 1.983        
cufflinks 3.84       High
cufflinks 2.088        
cufflinks 2.144        
cufflinks 3.516       High
cufflinks 1.811        
cufflinks 1.736        
cufflinks 1.735        
cufflinks 1.684        
cufflinks 2.049        
cufflinks 1.731        
cufflinks 1.888        
cufflinks 1.89        
cufflinks 3.095       High

0 Strain