Gene : Bradi2g18760 B. distachyon v3.1
Defline:  (1 of 158) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2394
Name:  ? Bradi2g18760 Secondary Identifier:  ? PAC:32774868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g18760 0.5kb upstream 0.5kb upstream 2901 true Bd2: 16609237-16612137 Brachypodium distachyon
Bradi2g18760 0.5kb upstream 0.5kb upstream 500 false Bd2: 16609237-16609736 Brachypodium distachyon
Bradi2g18760 0.5kb downstream 0.5kb downstream 2901 true Bd2: 16609737-16612637 Brachypodium distachyon
Bradi2g18760 0.5kb downstream 0.5kb downstream 500 false Bd2: 16612138-16612637 Brachypodium distachyon
Bradi2g18760 1.0kb upstream 1.0kb upstream 3401 true Bd2: 16608737-16612137 Brachypodium distachyon
Bradi2g18760 1.0kb upstream 1.0kb upstream 1000 false Bd2: 16608737-16609736 Brachypodium distachyon
Bradi2g18760 1.0kb downstream 1.0kb downstream 3401 true Bd2: 16609737-16613137 Brachypodium distachyon
Bradi2g18760 1.0kb downstream 1.0kb downstream 1000 false Bd2: 16612138-16613137 Brachypodium distachyon
Bradi2g18760 2.0kb upstream 2.0kb upstream 4401 true Bd2: 16607737-16612137 Brachypodium distachyon
Bradi2g18760 2.0kb upstream 2.0kb upstream 2000 false Bd2: 16607737-16609736 Brachypodium distachyon
Bradi2g18760 2.0kb downstream 2.0kb downstream 4401 true Bd2: 16609737-16614137 Brachypodium distachyon
Bradi2g18760 2.0kb downstream 2.0kb downstream 2000 false Bd2: 16612138-16614137 Brachypodium distachyon
Bradi2g18760 5.0kb upstream 5.0kb upstream 7401 true Bd2: 16604737-16612137 Brachypodium distachyon
Bradi2g18760 5.0kb upstream 5.0kb upstream 5000 false Bd2: 16604737-16609736 Brachypodium distachyon
Bradi2g18760 5.0kb downstream 5.0kb downstream 7401 true Bd2: 16609737-16617137 Brachypodium distachyon
Bradi2g18760 5.0kb downstream 5.0kb downstream 5000 false Bd2: 16612138-16617137 Brachypodium distachyon
Bradi2g18760 10.0kb upstream 10.0kb upstream 12401 true Bd2: 16599737-16612137 Brachypodium distachyon
Bradi2g18760 10.0kb upstream 10.0kb upstream 10000 false Bd2: 16599737-16609736 Brachypodium distachyon
Bradi2g18760 10.0kb downstream 10.0kb downstream 12401 true Bd2: 16609737-16622137 Brachypodium distachyon
Bradi2g18760 10.0kb downstream 10.0kb downstream 10000 false Bd2: 16612138-16622137 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587495 5269 Grass View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.269        
cufflinks 2.529        
cufflinks 2.012        
cufflinks 1.949        
cufflinks 1.211        
cufflinks 2.013        
cufflinks 2.252        
cufflinks 1.898        
cufflinks 2.184        
cufflinks 1.321        
cufflinks 1.734        
cufflinks 2.05        
cufflinks 0.744       Low
cufflinks 0.867       Low
cufflinks 1.307        
cufflinks 2.434        
cufflinks 1.361        
cufflinks 4.348       High
cufflinks 2.276        
cufflinks 0.626       Low
cufflinks 1.838        
cufflinks 1.862        
cufflinks 1.791        
cufflinks 1.786        
cufflinks 2.042        
cufflinks 1.494        
cufflinks 1.041       Low
cufflinks 1.736        
cufflinks 1.901        
cufflinks 2.885        

0 Strain