Gene : Bradi4g28320 B. distachyon v3.1
Defline:  (1 of 1) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  3618
Name:  ? Bradi4g28320 Secondary Identifier:  ? PAC:32783322
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7601 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28320 0.5kb upstream 0.5kb upstream 2999 true Bd4: 33595252-33598250 Brachypodium distachyon
Bradi4g28320 0.5kb upstream 0.5kb upstream 500 false Bd4: 33595252-33595751 Brachypodium distachyon
Bradi4g28320 0.5kb downstream 0.5kb downstream 2999 true Bd4: 33595752-33598750 Brachypodium distachyon
Bradi4g28320 0.5kb downstream 0.5kb downstream 500 false Bd4: 33598251-33598750 Brachypodium distachyon
Bradi4g28320 1.0kb upstream 1.0kb upstream 3499 true Bd4: 33594752-33598250 Brachypodium distachyon
Bradi4g28320 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33594752-33595751 Brachypodium distachyon
Bradi4g28320 1.0kb downstream 1.0kb downstream 3499 true Bd4: 33595752-33599250 Brachypodium distachyon
Bradi4g28320 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33598251-33599250 Brachypodium distachyon
Bradi4g28320 2.0kb upstream 2.0kb upstream 4499 true Bd4: 33593752-33598250 Brachypodium distachyon
Bradi4g28320 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33593752-33595751 Brachypodium distachyon
Bradi4g28320 2.0kb downstream 2.0kb downstream 4499 true Bd4: 33595752-33600250 Brachypodium distachyon
Bradi4g28320 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33598251-33600250 Brachypodium distachyon
Bradi4g28320 5.0kb upstream 5.0kb upstream 7499 true Bd4: 33590752-33598250 Brachypodium distachyon
Bradi4g28320 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33590752-33595751 Brachypodium distachyon
Bradi4g28320 5.0kb downstream 5.0kb downstream 7499 true Bd4: 33595752-33603250 Brachypodium distachyon
Bradi4g28320 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33598251-33603250 Brachypodium distachyon
Bradi4g28320 10.0kb upstream 10.0kb upstream 12499 true Bd4: 33585752-33598250 Brachypodium distachyon
Bradi4g28320 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33585752-33595751 Brachypodium distachyon
Bradi4g28320 10.0kb downstream 10.0kb downstream 12499 true Bd4: 33595752-33608250 Brachypodium distachyon
Bradi4g28320 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33598251-33608250 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
124575823 5269 Grass View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.052     High High
cufflinks 30.911     High  
cufflinks 21.549     High  
cufflinks 23.533     High  
cufflinks 11.436     High  
cufflinks 28.233     High  
cufflinks 31.931     High High
cufflinks 28.007     High  
cufflinks 24.582     High  
cufflinks 12.281     High  
cufflinks 5.222       Low
cufflinks 26.265     High  
cufflinks 8.372     High Low
cufflinks 6.688       Low
cufflinks 14.317     High  
cufflinks 31.69     High  
cufflinks 14.366     High  
cufflinks 38.404     High High
cufflinks 18.239     High  
cufflinks 5.645       Low
cufflinks 31.773     High  
cufflinks 17.587     High  
cufflinks 25.786     High  
cufflinks 24.77     High  
cufflinks 23.243     High  
cufflinks 17.704     High  
cufflinks 4.303       Low
cufflinks 17.045     High  
cufflinks 18.728     High  
cufflinks 46.385     High High

0 Strain