Gene : Bradi4g28420 B. distachyon v3.1
Defline:  (1 of 1) PTHR24319:SF26 - PROTEIN DHS-1 Genomic Order:  3637
Name:  ? Bradi4g28420 Secondary Identifier:  ? PAC:32783702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28420 0.5kb upstream 0.5kb upstream 4366 true Bd4: 33722049-33726414 Brachypodium distachyon
Bradi4g28420 0.5kb upstream 0.5kb upstream 500 false Bd4: 33725915-33726414 Brachypodium distachyon
Bradi4g28420 0.5kb downstream 0.5kb downstream 4366 true Bd4: 33721549-33725914 Brachypodium distachyon
Bradi4g28420 0.5kb downstream 0.5kb downstream 500 false Bd4: 33721549-33722048 Brachypodium distachyon
Bradi4g28420 1.0kb upstream 1.0kb upstream 4866 true Bd4: 33722049-33726914 Brachypodium distachyon
Bradi4g28420 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33725915-33726914 Brachypodium distachyon
Bradi4g28420 1.0kb downstream 1.0kb downstream 4866 true Bd4: 33721049-33725914 Brachypodium distachyon
Bradi4g28420 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33721049-33722048 Brachypodium distachyon
Bradi4g28420 2.0kb upstream 2.0kb upstream 5866 true Bd4: 33722049-33727914 Brachypodium distachyon
Bradi4g28420 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33725915-33727914 Brachypodium distachyon
Bradi4g28420 2.0kb downstream 2.0kb downstream 5866 true Bd4: 33720049-33725914 Brachypodium distachyon
Bradi4g28420 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33720049-33722048 Brachypodium distachyon
Bradi4g28420 5.0kb upstream 5.0kb upstream 8866 true Bd4: 33722049-33730914 Brachypodium distachyon
Bradi4g28420 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33725915-33730914 Brachypodium distachyon
Bradi4g28420 5.0kb downstream 5.0kb downstream 8866 true Bd4: 33717049-33725914 Brachypodium distachyon
Bradi4g28420 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33717049-33722048 Brachypodium distachyon
Bradi4g28420 10.0kb upstream 10.0kb upstream 13866 true Bd4: 33722049-33735914 Brachypodium distachyon
Bradi4g28420 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33725915-33735914 Brachypodium distachyon
Bradi4g28420 10.0kb downstream 10.0kb downstream 13866 true Bd4: 33712049-33725914 Brachypodium distachyon
Bradi4g28420 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33712049-33722048 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578829 5269 Grass View MSA
122045654 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121347612 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low Low
cufflinks 0.218       High
cufflinks 0.184        
cufflinks 0.205        
cufflinks 0.052     Low Low
cufflinks 0.189        
cufflinks 0.196        
cufflinks 0.086        
cufflinks 0.143        
cufflinks 0.07     Low  
cufflinks 0.122        
cufflinks 0.116        
cufflinks 0.119        
cufflinks 0.088        
cufflinks 0.071     Low  
cufflinks 0.172        
cufflinks 0.05     Low Low
cufflinks 0.243       High
cufflinks 0.121     Low  
cufflinks 0.036     Low Low
cufflinks 0.094     Low  
cufflinks 0.104     Low  
cufflinks 0.1        
cufflinks 0.107        
cufflinks 0.145        
cufflinks 0.164        
cufflinks 0.214       High
cufflinks 0.146        
cufflinks 0.123        
cufflinks 0.114     Low  

0 Strain