Gene : Bradi2g19510 B. distachyon v3.1
Defline:  (1 of 3) K07151 - dolichyl-diphosphooligosaccharide--protein glycosyltransferase (STT3) Genomic Order:  2488
Name:  ? Bradi2g19510 Secondary Identifier:  ? PAC:32774666
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi2g19510 0.5kb upstream 0.5kb upstream 7035 true Bd2: 17179455-17186489 Brachypodium distachyon
Bradi2g19510 0.5kb upstream 0.5kb upstream 500 false Bd2: 17179455-17179954 Brachypodium distachyon
Bradi2g19510 0.5kb downstream 0.5kb downstream 7035 true Bd2: 17179955-17186989 Brachypodium distachyon
Bradi2g19510 0.5kb downstream 0.5kb downstream 500 false Bd2: 17186490-17186989 Brachypodium distachyon
Bradi2g19510 1.0kb upstream 1.0kb upstream 7535 true Bd2: 17178955-17186489 Brachypodium distachyon
Bradi2g19510 1.0kb upstream 1.0kb upstream 1000 false Bd2: 17178955-17179954 Brachypodium distachyon
Bradi2g19510 1.0kb downstream 1.0kb downstream 7535 true Bd2: 17179955-17187489 Brachypodium distachyon
Bradi2g19510 1.0kb downstream 1.0kb downstream 1000 false Bd2: 17186490-17187489 Brachypodium distachyon
Bradi2g19510 2.0kb upstream 2.0kb upstream 8535 true Bd2: 17177955-17186489 Brachypodium distachyon
Bradi2g19510 2.0kb upstream 2.0kb upstream 2000 false Bd2: 17177955-17179954 Brachypodium distachyon
Bradi2g19510 2.0kb downstream 2.0kb downstream 8535 true Bd2: 17179955-17188489 Brachypodium distachyon
Bradi2g19510 2.0kb downstream 2.0kb downstream 2000 false Bd2: 17186490-17188489 Brachypodium distachyon
Bradi2g19510 5.0kb upstream 5.0kb upstream 11535 true Bd2: 17174955-17186489 Brachypodium distachyon
Bradi2g19510 5.0kb upstream 5.0kb upstream 5000 false Bd2: 17174955-17179954 Brachypodium distachyon
Bradi2g19510 5.0kb downstream 5.0kb downstream 11535 true Bd2: 17179955-17191489 Brachypodium distachyon
Bradi2g19510 5.0kb downstream 5.0kb downstream 5000 false Bd2: 17186490-17191489 Brachypodium distachyon
Bradi2g19510 10.0kb upstream 10.0kb upstream 16535 true Bd2: 17169955-17186489 Brachypodium distachyon
Bradi2g19510 10.0kb upstream 10.0kb upstream 10000 false Bd2: 17169955-17179954 Brachypodium distachyon
Bradi2g19510 10.0kb downstream 10.0kb downstream 16535 true Bd2: 17179955-17196489 Brachypodium distachyon
Bradi2g19510 10.0kb downstream 10.0kb downstream 10000 false Bd2: 17186490-17196489 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
124588615 5269 Grass View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.165     High  
cufflinks 21.452     High High
cufflinks 14.37     High  
cufflinks 16.386     High  
cufflinks 7.842       Low
cufflinks 20.68     High  
cufflinks 18.424     High  
cufflinks 12.375     High  
cufflinks 18.155     High  
cufflinks 7.088       Low
cufflinks 12.416     High  
cufflinks 16.673     High  
cufflinks 10.167     High  
cufflinks 11.659     High  
cufflinks 11.337     High  
cufflinks 20.477     High  
cufflinks 12.51     High  
cufflinks 31.194     High High
cufflinks 14.783     High  
cufflinks 3.489       Low
cufflinks 14.302     High  
cufflinks 12.246     High  
cufflinks 12.237     High  
cufflinks 17.152     High  
cufflinks 17.481     High  
cufflinks 12.657     High  
cufflinks 14.723     High  
cufflinks 10.676        
cufflinks 10.02        
cufflinks 16.696     High  

0 Strain